| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3508 |
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| Symbol | |
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| ID | 5423701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3903809 |
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| End bp | 3905704 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640882763 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001418394 |
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| Protein GI | 154247436 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.62585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.777237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATATC GCGAGATTGC CCGTGCCTGG GAGGCGTTTC ACCAGGACGG CATCGCCTCA
TCCGTCGTCC GTCCCGCAGT GCTGGCCTCC TGGCAGCGCT CGCGGCAGCA CGCCATCACG
GCGAGCCGGT CCGAAGCCCC CCTCGTGAGC GAGGCGGAGC TGCATCGCCG CCGCCAGCAG
AACACCCGGC TGATCGCCGC CGCACGCCCG GCCATGGACG AGGCGCGGCA CCTGCTTTCC
GACGCGCGCT CCATGCTGAT CCTCACCGAC ACCGAGGGCA CCATCCTCGA AACCGAGGGC
GACGCGCGGG CGGTGGATAC CGGGCAGGAG GTGAAGCTCC AGCGCGGCGG CCTGTGGTGC
GAGGCGCAGA TCGGCACCAA TGCCATCGGC ACCGCGCTCG CCTGCGGCCG GCCGGTGCAG
ATCCATGCCG CCGAGCATTT CTGCGCCAGC GTTCAGCGCT GGACCTGTGC CGCCGCTCCG
GTGCGCCATC CCGGCCATGG CGCGGTGATC GGTGCGGTGG ATGTCTCCGG CTCCACCGAT
ACCTTCAATC CGCAGAACCT CGCCCATGCG GTGGCCCTCG CCCAGCAGAT CGAGGCGGTG
CTGGGCCGGC GCATGGAGAT GGAGCACGAA CAGGTGCTGC GCCATTTCCT CTCCAAGCGC
TCGCTCTGGC TTTCGGAGGA AATCCTCGCC TTCGGCCGCT CCGGCGCGCT CATCTATTCC
ACAGATCGCG CGCTGAAGGA GGTGATCCGC CGCAACGCGC ACTTCATCGC CGACGGGCGC
CTCGCCGCGC TCAACGATGT GGCTCCGGCC GCCTGGGCCG AACGCGTCGC GGCGCTGCTG
CCGGGCGCCA GCGTCGAGAT CGTGCGCGAG GATGGCGAGG AGATCGGCGG CGTGGTGGTG
CTGCACGCCC CCCGCAAGCC GCGTCCGGTA ATGCGCGAGG CGACGCGGGA GCCGGAGGTA
CTGCCCTTCG AGACCATCAT CGGCGACAGC CCTGTGATGC GCGAGGTGCG GGAGAAGGCC
CGGCGCATGG CCGAGAGCGG CCTTCCCATC CTGCTCGAAG GCGAGACCGG GGTGGGCAAG
GAGGTGTTCG CCCGCGCCAT CCATGGCGGG CGCGCGCCTT GCGGTCCGTT CGTGCCGCTC
AATTGCGGCG GGCTGCCGCG CGACCTCATC GCCAGCGAGC TGTTCGGCTA CGAGAAAGGC
GCCTTCACCG GCGCCGACAC CGCCGGCAAG CAGGGCAAGG TGGAGGCAGC GGACGGCGGG
CTGCTCTGCC TCGACGAGAT CGGTGAGATG CCGCTGGAGC TGCAATCCTA CCTGCTGCGC
GTGCTGGAGG ATGGCGTCGT CTACCGCGTC GGCGGGCATA CGGGGCGGCG GGTCAACCTG
CGCCTCGTGT CCATGACCAA CCGTGACCTT TCCGGCGAGG TGGCGGCTGG GCGCTTCCGC
AAGGACCTGT TCTATCGCAT CGCCGCGCTG CGCCTGCGCA TCCCGCCGTT GCGCGAGCGC
GGCGCGGATG TGGCCTTGTT GCTCGACCAT TTCGGCCGCA GTGCCTCAGC CCGCGCCGGC
CTTCCCCCGC CCCGCTTCTC GCCGGCCGCC CACGCGGCGC TCATGGCCTA TGGGTGGCCC
GGCAACGTGC GCGAATTGCG CAACGTGGTG GATATGCTGG TGGCCATGGG CGGCACCGGT
TGCGACGCGG ACGCTCTGAT CGACATCGCC GACCTGCCGC AGGAGATCCG AGAGGAAACC
ACCGGGACGG CACGAGCCAC CGACCTCAAG GCGGTGGAGG AAGCTGCCAT CCGCGCCGCC
GTGGATGCCT GCGGGGGGAA CCTCTCCCGG GCCGCCCGCC GCCTCGGTAT CGCTCGCTCG
ACCCTCTACA TGCGCCTCTC CGCGCTGGAG CGCTGA
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| Protein sequence | MPYREIARAW EAFHQDGIAS SVVRPAVLAS WQRSRQHAIT ASRSEAPLVS EAELHRRRQQ
NTRLIAAARP AMDEARHLLS DARSMLILTD TEGTILETEG DARAVDTGQE VKLQRGGLWC
EAQIGTNAIG TALACGRPVQ IHAAEHFCAS VQRWTCAAAP VRHPGHGAVI GAVDVSGSTD
TFNPQNLAHA VALAQQIEAV LGRRMEMEHE QVLRHFLSKR SLWLSEEILA FGRSGALIYS
TDRALKEVIR RNAHFIADGR LAALNDVAPA AWAERVAALL PGASVEIVRE DGEEIGGVVV
LHAPRKPRPV MREATREPEV LPFETIIGDS PVMREVREKA RRMAESGLPI LLEGETGVGK
EVFARAIHGG RAPCGPFVPL NCGGLPRDLI ASELFGYEKG AFTGADTAGK QGKVEAADGG
LLCLDEIGEM PLELQSYLLR VLEDGVVYRV GGHTGRRVNL RLVSMTNRDL SGEVAAGRFR
KDLFYRIAAL RLRIPPLRER GADVALLLDH FGRSASARAG LPPPRFSPAA HAALMAYGWP
GNVRELRNVV DMLVAMGGTG CDADALIDIA DLPQEIREET TGTARATDLK AVEEAAIRAA
VDACGGNLSR AARRLGIARS TLYMRLSALE R
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