| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3492 |
|---|
| Symbol | |
|---|
| ID | 5424969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3888823 |
|---|
| End bp | 3889815 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640882747 |
|---|
| Product | putative agmatinase |
|---|
| Protein accession | YP_001418378 |
|---|
| Protein GI | 154247420 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0949327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.412166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCA CCAAGACCGA TCCGCTGCAT CCCCGCCCGG TGGATCGCGC CCTTGATCCC
GGCTTTCGCC ACGGTCAGTC CACCGAGCCC AATTATTCCG GCGTCACATC CTTCCTGCGC
CGGCGCTATG CCCGCGACGG TGGCGGAGCG GAGGTGGTGG TGTGGGGCGT GCCGCTGGAT
GTAGCCGTCT CCAACCGGCC CGGCACGCGA TTCGGACCGC GTGCCATCCG CGCTGCCTCC
ACCATCCTCG ACGGCGACCC GTTCTATCCG TTCGGCATCG ACCCGTTCGA GACGCTGGAT
GTGGTCGATG GCGGTGACTG CGTGTTCGAC TACGGCCTGC CCGCCGGGAT CCCCGCTGCC
ATAGCCGCGC AGGCGCGCGC CCACTATGCC CGCGGCGCCC ATCTGATGAC CCTCGGCGGC
GACCATTTCC TCACCTATCC GGTGCTTAAG GCGCTCACCA CTCATCTCGG CGAGCCGGTG
GCGCTGGTGC AGTTCGATGC GCACCAGGAT ACCTGGGAAG ACGGTGGCGA CCGGGTGGAC
CACGGCACCA TGATCACCCG AGCCGTGAAG GACGGGCTGA TCCGGGTGGA TCGCTCGATC
CAGGTGGGCA TCCGCACCTA TGCGCCCCAG ACCTGCGGCA TCGAGATCGT CCATGGGCTG
ACCGCCGCCG AGATGGGGCC GATCGCGCTG GCAGACCACA TCGCCGACCG GGTGGGGGAT
GCCCCGGTCT ATGTCACGTT CGACATCGAT GCGCTGGACC CCGCCTTCGC CCCGGGCACT
GGTACGCCGG TATGTGGCGG CCTCTCCACC CGCGAGGCCA TCTCCTGCCT GCGCAGGCTC
GGCGGCCTCG ACCTGAAGGG CTTCGACGTG GTGGAGGTGT CCCCGCCCTA TGATCACGCG
GAGATCACCG CGCTCGCCGG GGCGACGCTG GCCTCGGTCT ACCTGTGTCT CCTCGCCGAG
CGCAAGGCGA CCGGACGGCC GGTCGCGCTC TGA
|
|---|
| Protein sequence | MSSTKTDPLH PRPVDRALDP GFRHGQSTEP NYSGVTSFLR RRYARDGGGA EVVVWGVPLD
VAVSNRPGTR FGPRAIRAAS TILDGDPFYP FGIDPFETLD VVDGGDCVFD YGLPAGIPAA
IAAQARAHYA RGAHLMTLGG DHFLTYPVLK ALTTHLGEPV ALVQFDAHQD TWEDGGDRVD
HGTMITRAVK DGLIRVDRSI QVGIRTYAPQ TCGIEIVHGL TAAEMGPIAL ADHIADRVGD
APVYVTFDID ALDPAFAPGT GTPVCGGLST REAISCLRRL GGLDLKGFDV VEVSPPYDHA
EITALAGATL ASVYLCLLAE RKATGRPVAL
|
|---|
| |