Gene Xaut_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3487 
Symbol 
ID5422947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3883515 
End bp3884195 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID640882742 
Producthypothetical protein 
Protein accessionYP_001418373 
Protein GI154247415 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.181102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC CAAGCCCCGC CACCCAACAT CCCGCCACTC CCGCCGTGAC GCTGGCCGTC 
TCCGCGCTCG ATCTCGGGGC GCTCCTGTGC TCGCGGGTGT GCCATGACGT GATCAGCCCG
GTGGGCGCCA TCGTCAACGG CCTCGAGGTG CTGGAGGACG AGGACGCCGC CGACATGCGC
GATGTTGCCC TCGATCTCAT CGCCAAGAGC GCGCGGCAGG CTTCGGCCCG GCTCCAGTTC
ACCCGCCTCG CCTTCGGTGC CGCCGGCTCC GCCGGGGCGC GGCTTGACCT CGGCGATGCC
GAGCAGGTGG TGCGCCCGGT GATCGAGGAC GGCCGCACGC GGGTGGAATG GTCCCTGCCA
CGGGAGCTTC TGCCCAAGAA CCGGGTCAAG CTGCTGCTCA ACCTGGTGCT GCTCGCCGGC
ACCACCATTC CGCGCGGCGG GGTCATCCGC ATCTCGGCGG TGGGGGAGGG GGATGCCACC
GGCTTCGTGC TGGCTTCCAC CGGCGAGAAG GCGCGCATTC CGGAAGGGCT TCAGGCGCTA
GTCGACGGCG TGGCGCCCGA GGGTGGGCTT GATGCCCATT CGGTGCAGCC CTTCTATGCC
GGCATGCTGG CCCGCGACTG CGCCATCGCC ATCCGCTTCG CCCAGGACGG CGACACGGTA
ACCATCTCCA CGCCGGGCTG A
 
Protein sequence
MSTPSPATQH PATPAVTLAV SALDLGALLC SRVCHDVISP VGAIVNGLEV LEDEDAADMR 
DVALDLIAKS ARQASARLQF TRLAFGAAGS AGARLDLGDA EQVVRPVIED GRTRVEWSLP
RELLPKNRVK LLLNLVLLAG TTIPRGGVIR ISAVGEGDAT GFVLASTGEK ARIPEGLQAL
VDGVAPEGGL DAHSVQPFYA GMLARDCAIA IRFAQDGDTV TISTPG