| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3473 |
|---|
| Symbol | |
|---|
| ID | 5421284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3866591 |
|---|
| End bp | 3867079 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640882728 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001418359 |
|---|
| Protein GI | 154247401 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4101] Predicted mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.017049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.970184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCGG ATCATTCCCA CGACGACGGA CACGGCAAGA TCGACTGGCG CACCCACGGG
GTAAAGGTGA TCCCCGGCGA TAGCCTCGAT CCCAACACTG CCCAGACCCC CGGCATGAAC
CGGGCCACCG CCATCAACCA CGCGCGGGCC GGAGCGGAGA AGATCTGGGC CGGCACGGTG
CACATCCATC CGGACGCAAA GACCGGCGCC CACCACCATG GCGACCTGGA GAGCATCATC
TACGTGGTGA AGGGCCGCGC GCGCATGCGC TGGGGCGAGC ACCTGGAATA TGTGGCCGAG
GCCGGCCCCG GCGACTTCAT CTTCGTACCG CCCTATGTGC CCCACCAGGA GATCAACGCC
TCCCCCGACG AGACTCTCGA ATGCGTTCTG GTGCGCTCGG GACAGGATCC GGTGGTGGTG
AATCTCGACA TCGAGCCGGC CGAGAAGCCG GAGGCGGTGA AGTGGATCGA CCCCATCCAC
CGCGAATGA
|
|---|
| Protein sequence | MGADHSHDDG HGKIDWRTHG VKVIPGDSLD PNTAQTPGMN RATAINHARA GAEKIWAGTV
HIHPDAKTGA HHHGDLESII YVVKGRARMR WGEHLEYVAE AGPGDFIFVP PYVPHQEINA
SPDETLECVL VRSGQDPVVV NLDIEPAEKP EAVKWIDPIH RE
|
|---|
| |