| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3466 |
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| Symbol | |
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| ID | 5421264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3856767 |
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| End bp | 3857759 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640882720 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001418352 |
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| Protein GI | 154247394 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.106164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT TCCTGACCCC CTCCCGCCGC CAGTTCCTTG CCCTTGCCGG CGCGGGCGCC
GCCTCCGGCC TGCTGCCGTT CGCCGCGCAT GCCGCGCCCG ACACCCGCAA CACCGACACG
GTGCGCCTGA CCTGGGGCTT CCATGGCCTC ACCCTCATCG CCAAGGAGCG CGGCACCTTC
GAGAAGGCGT TGGCCGAAAA GGGCATCAAG GTGGAATGGC TCGGACCGTT CCCAAACCAT
GCGCCGACCC TGCAGGCGGT GACCGGCGGC AGCGCGGATT TCGGCTTCGG CGGCTCCACC
ACCCCCGCGC TGGCGGCCAT CATCGCCGGC TCGCCGCTGG TGTTCAGCCA GTTCGTGCTC
TACGAGCCGC GCACCACCGC CATCATCGCC AAGGACGGCT CGGGCATCGA CACGGTGTCG
GACCTGGTGG GCAAGTCGGT GGCGGTGAAC CGCTCGGGCC TGGGCGAATT CCTTTTGGTG
GCGGCGCTGG AGAAGAACGG CATCGACCGC TCCAAGGTCA AGTTCGTCTA TCTCAACCCG
CCGGACGCCG CCCCGGCGCT TGCCTCCGGC AAGGTGGACG CGTGGTCCAT GTGGAGCCCC
GGCGTCGATA TCGCGCGGCT CGACTACAAG GCCCACGACA TCTTCCTGGA AGGTCGCGAC
CTTGAATTCT ACATCGATTA CAGCTCCTAT GTGACCAGCC GCAAGTTCTC GCAGGAGAAT
TCGCAGATCG TCCGCGCCGT GGCCGCCGCC TATGAGGAGG AGGCCAAATG GGTGAATGCC
AACACGGTGG AGGCCGAGAC CATCGTGCAG AAGCGCGCCG GCTATTCCGA CGTGATCCGC
GACCAGTTCA TCGAGCGCCG GCGCACCTAC AAGCTCATCC CGGTCACCGA CAAGGCCTTC
GTCGCCGACC TGCAGAAGGC GGCGGACTGG CTGGTGGCGC GCAAGATCCT GCCCGAACCC
ATCACCGTGT CGGATCATCT TGCGCAGTTC TGA
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| Protein sequence | MSAFLTPSRR QFLALAGAGA ASGLLPFAAH AAPDTRNTDT VRLTWGFHGL TLIAKERGTF
EKALAEKGIK VEWLGPFPNH APTLQAVTGG SADFGFGGST TPALAAIIAG SPLVFSQFVL
YEPRTTAIIA KDGSGIDTVS DLVGKSVAVN RSGLGEFLLV AALEKNGIDR SKVKFVYLNP
PDAAPALASG KVDAWSMWSP GVDIARLDYK AHDIFLEGRD LEFYIDYSSY VTSRKFSQEN
SQIVRAVAAA YEEEAKWVNA NTVEAETIVQ KRAGYSDVIR DQFIERRRTY KLIPVTDKAF
VADLQKAADW LVARKILPEP ITVSDHLAQF
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