Gene Xaut_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3449 
Symbol 
ID5423939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3838053 
End bp3841718 
Gene Length3666 bp 
Protein Length1221 aa 
Translation table11 
GC content73% 
IMG OID640882703 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001418335 
Protein GI154247377 
COG category[C] Energy production and conversion 
COG ID[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)
[TIGR02996] repeat-companion domain TIGR02996 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.44659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG CCGTCGCCGC GCCCTGGGCC GTCCCTGAAA CCGCGCCGCT CTTTGCGGAA 
TTTGCGCCGC GGTCCAGCCC GCCCCTCCCC CTGCGCGCGG CCTTCGCCGC AGCCCACCGC
CGCCCCGAGC GCGCGGCGGT CGCCGATCTC CTGCCCGCCG CCCGCCTGCC GCCGGAACTG
CGCGAACGCA TCGCCGCGCG GGCGGGCGAT TTAGTCACCC GGCTGCGGGC CAGGCCGCGC
GGCTCGGTGG TGGCGGCGCT GGTGCAGGAA TATGCCCTCT CCAGCCAGGA GGGCGTCGCC
CTCATGTGCC TTGCCGAGGC GCTGCTACGC ATTCCCGACA GCGCCACCCG CGACGCCCTG
ATCCGGGACA AGATCGGCCA TGGCGACTGG CAGGCGCATC TGGGCGGCGG GCGCTCCCTG
TTCGTGAATG CGGCCACCTG GGGCCTCGTC CTCACCGGCA GGCTCACCGC CACTGCCGAC
GACGGGCGGC TCTCCTCGGC GCTCACCCGC CTCGTGGCGC GCTGCGGCGA GCCTCTGATC
CGGCGGGCGG TGGACATGGC CATCGGGCTG ATGGGCGCCG AGTTCGTCAT GGGCCGCACC
ATCGAGGAGG CTCTGCACCG CGCCGGCAGG CGCGAGGCGC AGGGCTTCTC CTATTCCTTC
GACATGCTGG GCGAGGCGGC CATGACGGCA GCCGACGCGG AGCGCTATTT CGCGGCCTAT
GCTGCCGCCA TCGAGGCCAT CGGCAAGGCT GCGGGGGGGC GGGGCATCCA CGCCGGGCCG
GGCATCTCGG TGAAGCTCTC CGCGCTCCAC CCGCGCTATG CCCGCGCCAA GGCGGGCCGG
GTGATGGCGG AGCTGCTGCC GCGCCTCCAA CGCCTCGCGC TGCTGGCGCG GCGCCACGAC
ATCGGCCTCA ACATCGATGC GGAGGAGCAG GACCGCCTCG AACTCTCCCT CGACCTGCTG
GAGGCGCTCG CCGCCCATCC CGGTCTTGCG GGGTGGAACG GCATCGGCTT CGTGGTGCAG
GCCTATGGCA AGCGCTGCCC GGCGGTGCTG GACTTCATCA TCGATCTCGC CCGCCGCACC
GGCCGGCGCA TCATGGTGCG CCTCGTGAAG GGCGCCTATT GGGATGCCGA GATAAAGCGC
GCGCAGGTGG ACGGGATGGC GGATTTTCCC GTCTTCACCC GCAAGGTGCA CACCGACCTC
TGCTACATCG CCTGCGCCCG CAAGCTGCTG GCCGCGCGCG ATGCGGTCTT CCCCCAGTTC
GCCACCCACA ATGCCCAGAC GCTGGCGGCC ATCTATGAGC TGGCGGGGCC GGATTTCCGG
GTCGGCGACT ATGAGTTCCA GTGCCTGCAC GGCATGGGCG AAGCTTTGTA CGAGGAGGTG
GTGGGGCCGC TTACCCGGCC GTGCCGTATC TATGCGCCGG TGGGCACCCA CGAGACGCTG
CTCGCCTATC TGGTGCGGCG GCTGCTGGAG AACGGGGCCA ATTCCTCCTT CGTCCATCGC
CTTGCCGATG ACAGCGTGCC GCTGGCAGAG CTGATCGCCG ATCCGGCCGA GACCGTGGCC
GCCATGGCCG ACCCCGGCGC CCCCAGCCCC GCCATCGCCG CCCCGCGCGA TCTTTATGGA
AGCCGGGCCA ATTCCGCCGG CCTCGACCTG TCGAGCGACG CCGTGCTGGC CGCCCTAGGC
GAGACACTTG CCGCCAGCCG CGAGACGCCA TGGCGGGCGC AGCCTGCGGG GGGCGGCGGG
CCGGCGCGGG TGGTGCGTAA TCCCGGCGAT CATCGCGACG TGGTGGGTGA AGTGCGCGAG
GCCGGCGCCG AAGACGTGGC GCGGGCGGTG GCTGTGGCGA GGGGCGCTGC GCCCGGCTGG
GCGGCGCGGA CGCCGGCCGA GCGGGCCGCG CCTCTGCGTG CCGCCGCCGA CATGCTGGAA
GCCCAGATGC CGCATCTGCT CGGCCTCATC ATGCGCGAGG CGGGCAAGTC CGCCGCCAAT
GCGGTGGCCG AGGTTCGCGA GGCGGTGGAT TTCCTGCGCT ATTATGCCGA CGAGGCCACC
GCCCGCCTCA CCGCCGCCCA TCGCCCGCTC GGGCCGGTGG CCTGCATCAG CCCGTGGAAT
TTTCCCCTCG CCATCTTCAC CGGACAGGTG GCGGCGGCGC TGGCGGCGGG CAATTGCGTG
CTGGCGAAGC CTGCGGAGGA AACGCCCCTC GTCGCCGCCG AGGCGGTGCG CCTGCTGCAC
GCCGCCGGCA TACCGCAGGA CGTGCTCCAA CTGCTACCCG GCGACGGAGT GGTGGGGGCT
GCGCTGGTCG AGGCACCGGA GGTGGCGGGT GTCATGTTCA CCGGCTCCAC GCAGGTGGCG
CGGGCCATCG CCGGGGTGCT CGCCTGCCGC CTGTCGCCCA CTGGGCGGCC GGTGCCGCTC
ATCGCCGAGA CCGGCGGGCA GAATGCCATG ATCGTGGACA GTTCCGCCCT GCCGGAGCAG
GTGGTTGCGG ACGTGCTCGC CTCCGCCTTC GACAGCGCCG GCCAGCGCTG CTCGGCCCTG
CGCGTGCTGT GCCTGCAGGA GGAGGTGGCG GACGCCATGC TCGCCATGCT GAAGGGCGCC
ATGGCGGAGC TGGAGATCGG CCGCACGGAT CGGCTCGCGG TGGACGTTGG ACCGGTCATC
ACCGCCGAGG CGCGGGCTGG CATCGAAGGA CATGTGGCGG CCATGGCGGC AAGGGGCTTT
CCCATCCATC GCCTGCCGCT GCCGGTGGAG GCGGCCAATG GCACCTTCGT GGCGCCGACG
CTGATCGAGA TTTCATCCAT GGCCGATCTC ACCCACGAAG TATTCGGCCC GGTGCTGCAT
GTGCTGCGCT GGCGGCGGGC CGATCTTGGC CGGCTCGTGG ATGACATCAA CGCCACCGGC
TACGGCCTCA CCTTCGGCCT GCACACGCGG CTCGACGAGA CCATCGCCGC GGTGACGGGC
AAGGTGCAGG CCGGCAATCT CTATGTGAAC CGCAACATGA TCGGCGCGGT GGTGGGGGTG
CAGCCCTTCG GCGGCCACGG CCTCTCCGGT ACCGGGCCGA AGGCCGGCGG GCCGCTTTAT
CTCAGCCGGC TGGTCACCGG GCCGGCCTTC GCGCTGGGCG CGGGCACGGC GGACCACGCG
GCGCTGGCCT TCGCCGACTG GCTGGACGAG CGAGGACGCG CGGACGACGG GGCGGCGGTG
CGGGCGCTGG CGCAGGTCGT GCCCCTCGGC CTGTCGCTGG ACCTGCCCGG CCCGGCAGGC
GAGCGCAACA CCTGGCGGCT GCGCCCGCGC GGCTCGCTGC TCCTGCTCCC GGCAAGCGAG
AGGGGGCTGA TGCGCCAGAT CGGCATGGCG CTGGCCACCG GCAACCGGGC GGTGGTCGAG
GCCGAGGCGG GGCTCTTGAG CCAGCTCGCG GACCTGCCGC CGGCGGTAGC CGCGCGCATC
CGCACCGAAG GCGGGGACGG ACCCTTCGCG GCGGCGCTGG CAGAGGGGGA GGGGGCGCGG
CTCGTGGCCG TGGCGCAGCG TCTTGCCGCC CTGCCGGGGC CGATCGTGCC GCTCCATGGG
GCGACGGGGG AGGAGATCGC CGCCTCTCCC TTCGCCTTCC CGGCGCACCT GCTGCTGGAA
GAGGTCTCGC TGAGCGTGAA CAGCGCGGCG GCCGGCGGTA ATGCCAGCCT CCTCGCCGTG
GCCTGA
 
Protein sequence
MIPAVAAPWA VPETAPLFAE FAPRSSPPLP LRAAFAAAHR RPERAAVADL LPAARLPPEL 
RERIAARAGD LVTRLRARPR GSVVAALVQE YALSSQEGVA LMCLAEALLR IPDSATRDAL
IRDKIGHGDW QAHLGGGRSL FVNAATWGLV LTGRLTATAD DGRLSSALTR LVARCGEPLI
RRAVDMAIGL MGAEFVMGRT IEEALHRAGR REAQGFSYSF DMLGEAAMTA ADAERYFAAY
AAAIEAIGKA AGGRGIHAGP GISVKLSALH PRYARAKAGR VMAELLPRLQ RLALLARRHD
IGLNIDAEEQ DRLELSLDLL EALAAHPGLA GWNGIGFVVQ AYGKRCPAVL DFIIDLARRT
GRRIMVRLVK GAYWDAEIKR AQVDGMADFP VFTRKVHTDL CYIACARKLL AARDAVFPQF
ATHNAQTLAA IYELAGPDFR VGDYEFQCLH GMGEALYEEV VGPLTRPCRI YAPVGTHETL
LAYLVRRLLE NGANSSFVHR LADDSVPLAE LIADPAETVA AMADPGAPSP AIAAPRDLYG
SRANSAGLDL SSDAVLAALG ETLAASRETP WRAQPAGGGG PARVVRNPGD HRDVVGEVRE
AGAEDVARAV AVARGAAPGW AARTPAERAA PLRAAADMLE AQMPHLLGLI MREAGKSAAN
AVAEVREAVD FLRYYADEAT ARLTAAHRPL GPVACISPWN FPLAIFTGQV AAALAAGNCV
LAKPAEETPL VAAEAVRLLH AAGIPQDVLQ LLPGDGVVGA ALVEAPEVAG VMFTGSTQVA
RAIAGVLACR LSPTGRPVPL IAETGGQNAM IVDSSALPEQ VVADVLASAF DSAGQRCSAL
RVLCLQEEVA DAMLAMLKGA MAELEIGRTD RLAVDVGPVI TAEARAGIEG HVAAMAARGF
PIHRLPLPVE AANGTFVAPT LIEISSMADL THEVFGPVLH VLRWRRADLG RLVDDINATG
YGLTFGLHTR LDETIAAVTG KVQAGNLYVN RNMIGAVVGV QPFGGHGLSG TGPKAGGPLY
LSRLVTGPAF ALGAGTADHA ALAFADWLDE RGRADDGAAV RALAQVVPLG LSLDLPGPAG
ERNTWRLRPR GSLLLLPASE RGLMRQIGMA LATGNRAVVE AEAGLLSQLA DLPPAVAARI
RTEGGDGPFA AALAEGEGAR LVAVAQRLAA LPGPIVPLHG ATGEEIAASP FAFPAHLLLE
EVSLSVNSAA AGGNASLLAV A