Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3449 |
Symbol | |
ID | 5423939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3838053 |
End bp | 3841718 |
Gene Length | 3666 bp |
Protein Length | 1221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640882703 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001418335 |
Protein GI | 154247377 |
COG category | [C] Energy production and conversion |
COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) [TIGR02996] repeat-companion domain TIGR02996 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.44659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCCG CCGTCGCCGC GCCCTGGGCC GTCCCTGAAA CCGCGCCGCT CTTTGCGGAA TTTGCGCCGC GGTCCAGCCC GCCCCTCCCC CTGCGCGCGG CCTTCGCCGC AGCCCACCGC CGCCCCGAGC GCGCGGCGGT CGCCGATCTC CTGCCCGCCG CCCGCCTGCC GCCGGAACTG CGCGAACGCA TCGCCGCGCG GGCGGGCGAT TTAGTCACCC GGCTGCGGGC CAGGCCGCGC GGCTCGGTGG TGGCGGCGCT GGTGCAGGAA TATGCCCTCT CCAGCCAGGA GGGCGTCGCC CTCATGTGCC TTGCCGAGGC GCTGCTACGC ATTCCCGACA GCGCCACCCG CGACGCCCTG ATCCGGGACA AGATCGGCCA TGGCGACTGG CAGGCGCATC TGGGCGGCGG GCGCTCCCTG TTCGTGAATG CGGCCACCTG GGGCCTCGTC CTCACCGGCA GGCTCACCGC CACTGCCGAC GACGGGCGGC TCTCCTCGGC GCTCACCCGC CTCGTGGCGC GCTGCGGCGA GCCTCTGATC CGGCGGGCGG TGGACATGGC CATCGGGCTG ATGGGCGCCG AGTTCGTCAT GGGCCGCACC ATCGAGGAGG CTCTGCACCG CGCCGGCAGG CGCGAGGCGC AGGGCTTCTC CTATTCCTTC GACATGCTGG GCGAGGCGGC CATGACGGCA GCCGACGCGG AGCGCTATTT CGCGGCCTAT GCTGCCGCCA TCGAGGCCAT CGGCAAGGCT GCGGGGGGGC GGGGCATCCA CGCCGGGCCG GGCATCTCGG TGAAGCTCTC CGCGCTCCAC CCGCGCTATG CCCGCGCCAA GGCGGGCCGG GTGATGGCGG AGCTGCTGCC GCGCCTCCAA CGCCTCGCGC TGCTGGCGCG GCGCCACGAC ATCGGCCTCA ACATCGATGC GGAGGAGCAG GACCGCCTCG AACTCTCCCT CGACCTGCTG GAGGCGCTCG CCGCCCATCC CGGTCTTGCG GGGTGGAACG GCATCGGCTT CGTGGTGCAG GCCTATGGCA AGCGCTGCCC GGCGGTGCTG GACTTCATCA TCGATCTCGC CCGCCGCACC GGCCGGCGCA TCATGGTGCG CCTCGTGAAG GGCGCCTATT GGGATGCCGA GATAAAGCGC GCGCAGGTGG ACGGGATGGC GGATTTTCCC GTCTTCACCC GCAAGGTGCA CACCGACCTC TGCTACATCG CCTGCGCCCG CAAGCTGCTG GCCGCGCGCG ATGCGGTCTT CCCCCAGTTC GCCACCCACA ATGCCCAGAC GCTGGCGGCC ATCTATGAGC TGGCGGGGCC GGATTTCCGG GTCGGCGACT ATGAGTTCCA GTGCCTGCAC GGCATGGGCG AAGCTTTGTA CGAGGAGGTG GTGGGGCCGC TTACCCGGCC GTGCCGTATC TATGCGCCGG TGGGCACCCA CGAGACGCTG CTCGCCTATC TGGTGCGGCG GCTGCTGGAG AACGGGGCCA ATTCCTCCTT CGTCCATCGC CTTGCCGATG ACAGCGTGCC GCTGGCAGAG CTGATCGCCG ATCCGGCCGA GACCGTGGCC GCCATGGCCG ACCCCGGCGC CCCCAGCCCC GCCATCGCCG CCCCGCGCGA TCTTTATGGA AGCCGGGCCA ATTCCGCCGG CCTCGACCTG TCGAGCGACG CCGTGCTGGC CGCCCTAGGC GAGACACTTG CCGCCAGCCG CGAGACGCCA TGGCGGGCGC AGCCTGCGGG GGGCGGCGGG CCGGCGCGGG TGGTGCGTAA TCCCGGCGAT CATCGCGACG TGGTGGGTGA AGTGCGCGAG GCCGGCGCCG AAGACGTGGC GCGGGCGGTG GCTGTGGCGA GGGGCGCTGC GCCCGGCTGG GCGGCGCGGA CGCCGGCCGA GCGGGCCGCG CCTCTGCGTG CCGCCGCCGA CATGCTGGAA GCCCAGATGC CGCATCTGCT CGGCCTCATC ATGCGCGAGG CGGGCAAGTC CGCCGCCAAT GCGGTGGCCG AGGTTCGCGA GGCGGTGGAT TTCCTGCGCT ATTATGCCGA CGAGGCCACC GCCCGCCTCA CCGCCGCCCA TCGCCCGCTC GGGCCGGTGG CCTGCATCAG CCCGTGGAAT TTTCCCCTCG CCATCTTCAC CGGACAGGTG GCGGCGGCGC TGGCGGCGGG CAATTGCGTG CTGGCGAAGC CTGCGGAGGA AACGCCCCTC GTCGCCGCCG AGGCGGTGCG CCTGCTGCAC GCCGCCGGCA TACCGCAGGA CGTGCTCCAA CTGCTACCCG GCGACGGAGT GGTGGGGGCT GCGCTGGTCG AGGCACCGGA GGTGGCGGGT GTCATGTTCA CCGGCTCCAC GCAGGTGGCG CGGGCCATCG CCGGGGTGCT CGCCTGCCGC CTGTCGCCCA CTGGGCGGCC GGTGCCGCTC ATCGCCGAGA CCGGCGGGCA GAATGCCATG ATCGTGGACA GTTCCGCCCT GCCGGAGCAG GTGGTTGCGG ACGTGCTCGC CTCCGCCTTC GACAGCGCCG GCCAGCGCTG CTCGGCCCTG CGCGTGCTGT GCCTGCAGGA GGAGGTGGCG GACGCCATGC TCGCCATGCT GAAGGGCGCC ATGGCGGAGC TGGAGATCGG CCGCACGGAT CGGCTCGCGG TGGACGTTGG ACCGGTCATC ACCGCCGAGG CGCGGGCTGG CATCGAAGGA CATGTGGCGG CCATGGCGGC AAGGGGCTTT CCCATCCATC GCCTGCCGCT GCCGGTGGAG GCGGCCAATG GCACCTTCGT GGCGCCGACG CTGATCGAGA TTTCATCCAT GGCCGATCTC ACCCACGAAG TATTCGGCCC GGTGCTGCAT GTGCTGCGCT GGCGGCGGGC CGATCTTGGC CGGCTCGTGG ATGACATCAA CGCCACCGGC TACGGCCTCA CCTTCGGCCT GCACACGCGG CTCGACGAGA CCATCGCCGC GGTGACGGGC AAGGTGCAGG CCGGCAATCT CTATGTGAAC CGCAACATGA TCGGCGCGGT GGTGGGGGTG CAGCCCTTCG GCGGCCACGG CCTCTCCGGT ACCGGGCCGA AGGCCGGCGG GCCGCTTTAT CTCAGCCGGC TGGTCACCGG GCCGGCCTTC GCGCTGGGCG CGGGCACGGC GGACCACGCG GCGCTGGCCT TCGCCGACTG GCTGGACGAG CGAGGACGCG CGGACGACGG GGCGGCGGTG CGGGCGCTGG CGCAGGTCGT GCCCCTCGGC CTGTCGCTGG ACCTGCCCGG CCCGGCAGGC GAGCGCAACA CCTGGCGGCT GCGCCCGCGC GGCTCGCTGC TCCTGCTCCC GGCAAGCGAG AGGGGGCTGA TGCGCCAGAT CGGCATGGCG CTGGCCACCG GCAACCGGGC GGTGGTCGAG GCCGAGGCGG GGCTCTTGAG CCAGCTCGCG GACCTGCCGC CGGCGGTAGC CGCGCGCATC CGCACCGAAG GCGGGGACGG ACCCTTCGCG GCGGCGCTGG CAGAGGGGGA GGGGGCGCGG CTCGTGGCCG TGGCGCAGCG TCTTGCCGCC CTGCCGGGGC CGATCGTGCC GCTCCATGGG GCGACGGGGG AGGAGATCGC CGCCTCTCCC TTCGCCTTCC CGGCGCACCT GCTGCTGGAA GAGGTCTCGC TGAGCGTGAA CAGCGCGGCG GCCGGCGGTA ATGCCAGCCT CCTCGCCGTG GCCTGA
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Protein sequence | MIPAVAAPWA VPETAPLFAE FAPRSSPPLP LRAAFAAAHR RPERAAVADL LPAARLPPEL RERIAARAGD LVTRLRARPR GSVVAALVQE YALSSQEGVA LMCLAEALLR IPDSATRDAL IRDKIGHGDW QAHLGGGRSL FVNAATWGLV LTGRLTATAD DGRLSSALTR LVARCGEPLI RRAVDMAIGL MGAEFVMGRT IEEALHRAGR REAQGFSYSF DMLGEAAMTA ADAERYFAAY AAAIEAIGKA AGGRGIHAGP GISVKLSALH PRYARAKAGR VMAELLPRLQ RLALLARRHD IGLNIDAEEQ DRLELSLDLL EALAAHPGLA GWNGIGFVVQ AYGKRCPAVL DFIIDLARRT GRRIMVRLVK GAYWDAEIKR AQVDGMADFP VFTRKVHTDL CYIACARKLL AARDAVFPQF ATHNAQTLAA IYELAGPDFR VGDYEFQCLH GMGEALYEEV VGPLTRPCRI YAPVGTHETL LAYLVRRLLE NGANSSFVHR LADDSVPLAE LIADPAETVA AMADPGAPSP AIAAPRDLYG SRANSAGLDL SSDAVLAALG ETLAASRETP WRAQPAGGGG PARVVRNPGD HRDVVGEVRE AGAEDVARAV AVARGAAPGW AARTPAERAA PLRAAADMLE AQMPHLLGLI MREAGKSAAN AVAEVREAVD FLRYYADEAT ARLTAAHRPL GPVACISPWN FPLAIFTGQV AAALAAGNCV LAKPAEETPL VAAEAVRLLH AAGIPQDVLQ LLPGDGVVGA ALVEAPEVAG VMFTGSTQVA RAIAGVLACR LSPTGRPVPL IAETGGQNAM IVDSSALPEQ VVADVLASAF DSAGQRCSAL RVLCLQEEVA DAMLAMLKGA MAELEIGRTD RLAVDVGPVI TAEARAGIEG HVAAMAARGF PIHRLPLPVE AANGTFVAPT LIEISSMADL THEVFGPVLH VLRWRRADLG RLVDDINATG YGLTFGLHTR LDETIAAVTG KVQAGNLYVN RNMIGAVVGV QPFGGHGLSG TGPKAGGPLY LSRLVTGPAF ALGAGTADHA ALAFADWLDE RGRADDGAAV RALAQVVPLG LSLDLPGPAG ERNTWRLRPR GSLLLLPASE RGLMRQIGMA LATGNRAVVE AEAGLLSQLA DLPPAVAARI RTEGGDGPFA AALAEGEGAR LVAVAQRLAA LPGPIVPLHG ATGEEIAASP FAFPAHLLLE EVSLSVNSAA AGGNASLLAV A
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