Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3353 |
Symbol | |
ID | 5423931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 3732585 |
End bp | 3734276 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640882603 |
Product | major facilitator transporter |
Protein accession | YP_001418239 |
Protein GI | 154247281 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.267737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA CGACTGCAGG GGCGGCCGCC AAGCCGCGTC CCATGAGCCG GGAGGAGAAG AAGGTCATCT TCGCCTCCTC CCTCGGCACC GTATTCGAGT GGTACGATTT TTATCTGTAC GGCTCGCTGG CGGCCATCAT CGGCGCCCAG TTCTTCAATG TGGCGGGCGC CGACGGCAAG CCCATGTTCG ACCAGGCGAC GCGCGACATC TTCGCGTTGC TCGCCTTTGC CGCCGGCTTC CTGGTGCGGC CGTTCGGCGC CATCGTGTTC GGGCGCATCG GCGACCTCGT CGGCCGCAAA TATACCTTCC TCGTCACCAT CCTCATCATG GGCCTGTCGA CTTTCATCGT CGGCATTCTG CCCTCCTCCA CCCAGATCGG CATCCTCGCC CCGATCGTCC TCATCGGCCT GCGCCTGCTC CAGGGCCTGG CGCTGGGCGG CGAGTACGGC GGCGCGGCGA CCTATGTGGC GGAGCATGCC CCCCACGGGC GGCGCGGCTT CTACACCTCG TGGATCCAGA CCACCGCTAC GCTGGGACTG TTCCTGTCGC TGATCATCAT CCTGGTCACC CGCACCCTGG TGGGCGAGCC GGCGTTCGCG GCCTGGGGCT GGCGCATTCC GTTCCTGGTA TCCATCGCCC TGCTCGGCAT CTCGGTGTGG ATCCGGCTCC AGCTCTCCGA ATCGCCCACC TTCAAGAAGA TGAAGGAGGA GGGCACCACC TCCAAGGCGC CGCTTTCGGA AGCCTTCGGC GCTTGGGGCA ACCTGAAAGT CGTCCTGATC GCCCTGTTCG GCCTTGTCGC GGGCCAGGGC GTGGTCTGGT ACACGGGCCA GTTCTATGCC CTGTTCTTCC TGCAATCGAT CCTGAAGGTG GACGGCTACA CCTCCAACCT GCTGATCGCC TGGTCGCTGG TGTTCGGCAC CGGCTTCTTC GTGTTCTTCG GCTGGCTGTC GGACAAGATC GGCCGCAAGC CCATCATCCT CGCCGGCTGC CTGATCGCCG CCGCGAGCTA CTTCCCGCTG TTCAACATGA TCACCTCCTA CGCCAACCCG GCGCTGGAGA AGGCCATCCA GAACGTGCGG GTGACGGTGG TGTCCGACCC GGCCAATTGC GGCAGCCTGT TCAACCCGGT GGGCACCCGC GTCTATACCG CGCCGTGCGA CATGGCCCGC GACTTCCTGG CGAAGTCCTC GGTGAAGTAC TCCACGGAAC CCGGCCCCGC CGGCGCGCCG GTGCAGTTGA AGGTGAACGA CGTGGTGGTG CCCTACGGCC CGGACTTCAA CAAGTCTGCC GCCGCAGCGC TGCAGGCGGC GGGCTATCCC ACCGCCGCCA CGAACAAGGA CATCATCAAG ATGGCCCATC CGTTCGACAT CTTCCAGGCG CGAACGGCTG CTGTGATCGG GCTGCTGTTC ATCCTGGTGC TGTTCGTGAC CATGGTGTAC GGCCCCATCG CGGCGGCGCT GGTGGAGCTG TTCCCGGCCC GCATCCGCTA CACCTCCATG TCGCTGCCCT ACCACATCGG CAACGGCTGG TTCGGCGGCC TTCTGCCGGC CACCGCCTTC GCCATGGTGG CGGCCACCGG CGATATCTAC TACGGCCTCT GGTACCCGAT CGTGATCGCC CTGATGACCT TTATCATCGG CCTCCTGTTC GTGCCCGAGA CCAAGGACCG CAACATCGAC CACTGGCACT GA
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Protein sequence | MSVTTAGAAA KPRPMSREEK KVIFASSLGT VFEWYDFYLY GSLAAIIGAQ FFNVAGADGK PMFDQATRDI FALLAFAAGF LVRPFGAIVF GRIGDLVGRK YTFLVTILIM GLSTFIVGIL PSSTQIGILA PIVLIGLRLL QGLALGGEYG GAATYVAEHA PHGRRGFYTS WIQTTATLGL FLSLIIILVT RTLVGEPAFA AWGWRIPFLV SIALLGISVW IRLQLSESPT FKKMKEEGTT SKAPLSEAFG AWGNLKVVLI ALFGLVAGQG VVWYTGQFYA LFFLQSILKV DGYTSNLLIA WSLVFGTGFF VFFGWLSDKI GRKPIILAGC LIAAASYFPL FNMITSYANP ALEKAIQNVR VTVVSDPANC GSLFNPVGTR VYTAPCDMAR DFLAKSSVKY STEPGPAGAP VQLKVNDVVV PYGPDFNKSA AAALQAAGYP TAATNKDIIK MAHPFDIFQA RTAAVIGLLF ILVLFVTMVY GPIAAALVEL FPARIRYTSM SLPYHIGNGW FGGLLPATAF AMVAATGDIY YGLWYPIVIA LMTFIIGLLF VPETKDRNID HWH
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