Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3348 |
Symbol | |
ID | 5423016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3726614 |
End bp | 3727825 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640882597 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001418234 |
Protein GI | 154247276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.164921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCTG CCCTTGCCGC GGCGACCATG CTGTCATGCG TGGTCGCAGC CCATGCGGAG GATCTTCCCA CCTTCCGTAT CGGCGTGCTC AACGACCAGT CGAGCCTCTA TTCGGACATT GCCGGGCCCG GTTCCGTCAC AGCGGCGCAG ATGGCGGTGG AGGATTTCAA GCCCGAGAAG CACGGCTTCA AGGTGGAGGT CGTCTCGGCC GATCACCAGA ACAAGGCGGA CGTGGGCTCA TCCATTGCCC GGCGCTGGTT CGACCTCGAC AAGGTGGACG CCATCGTCGA CGTGCCCACC TCGTCGGTCG CGCTCGCCGT CGCCGACATC AGCCGCGACA AGAACAAGGT GTTCCTTGTC GCCAGCGCGG GCAGCTCCGA CCTCACCGGC AAGGCCTGCA CGCCCAACAC GGTCCACTGG ACCTACGACA CCTGGGCGCT GGCCAACGGC ACGGCCCGCG CCATGATCAA GCAGGGCGGC ACGTCCTGGT ACTTCCTCAC CGCCGACTAT GCCTTCGGCC ACGCCCTGGA GCGCGACGCC GCCGAGGTGG TGAAGGCCAA TGGCGGCCAG GTGATGGGTC GTGCGCTGGC GCCGTTCCAG ACCTCGGACT TCTCCTCCTT CATCCTGCAG GCCCAGGGCA GCGGGGCAAA GGTGGTGGCG CTGGCCAATT CCGGCGGCGA CACCATCAAT TCGGTTAAGC AGGCGGCCGA GTTCGGCCTC AGCCAGAAGC AGAAGCTGGT GAGCCTGCTC ATCTTCCTGT CGGACATCCA CTCCCTCGGC CTCAAGACGG CGCAGGGCCT GATGCTGACG AACGCCTTCT ACTGGAACCT CAACGACGGC ACCCGCGCCT TCGGCAAGGC CTTTGGCGCC CGCAACGCTG GCCGCATGCC CACCATGAAC CAGGCCGGCA CCTATGCCTC CACCCTGCAC TGGATGAAGG CCATCGCCGC CATGGACAAG GCCAAGGCGC ACGATGGAGC CGCCGTGGTG GCGCAGATGA AGGCCATGCC CACGGACGAC CCGCTGTTCG GCAAGGGCGA GATCCGCGCC GACGGCCGCA CCATTCACGA CATGTTCCTG TGGCAGGTGA AGACGCCGGA GGAGTCCAAA GTGCCCTACG ACTATCTCAA GCTCATCGCC ACCATCCCCG GCAACGAGGC GTTCCGACCC ATGTCGCCGG AGACCTGCCC CATGCTGAAG AAGGCCGGCT GA
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Protein sequence | MRAALAAATM LSCVVAAHAE DLPTFRIGVL NDQSSLYSDI AGPGSVTAAQ MAVEDFKPEK HGFKVEVVSA DHQNKADVGS SIARRWFDLD KVDAIVDVPT SSVALAVADI SRDKNKVFLV ASAGSSDLTG KACTPNTVHW TYDTWALANG TARAMIKQGG TSWYFLTADY AFGHALERDA AEVVKANGGQ VMGRALAPFQ TSDFSSFILQ AQGSGAKVVA LANSGGDTIN SVKQAAEFGL SQKQKLVSLL IFLSDIHSLG LKTAQGLMLT NAFYWNLNDG TRAFGKAFGA RNAGRMPTMN QAGTYASTLH WMKAIAAMDK AKAHDGAAVV AQMKAMPTDD PLFGKGEIRA DGRTIHDMFL WQVKTPEESK VPYDYLKLIA TIPGNEAFRP MSPETCPMLK KAG
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