Gene Xaut_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3348 
Symbol 
ID5423016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3726614 
End bp3727825 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID640882597 
Productextracellular ligand-binding receptor 
Protein accessionYP_001418234 
Protein GI154247276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.164921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTG CCCTTGCCGC GGCGACCATG CTGTCATGCG TGGTCGCAGC CCATGCGGAG 
GATCTTCCCA CCTTCCGTAT CGGCGTGCTC AACGACCAGT CGAGCCTCTA TTCGGACATT
GCCGGGCCCG GTTCCGTCAC AGCGGCGCAG ATGGCGGTGG AGGATTTCAA GCCCGAGAAG
CACGGCTTCA AGGTGGAGGT CGTCTCGGCC GATCACCAGA ACAAGGCGGA CGTGGGCTCA
TCCATTGCCC GGCGCTGGTT CGACCTCGAC AAGGTGGACG CCATCGTCGA CGTGCCCACC
TCGTCGGTCG CGCTCGCCGT CGCCGACATC AGCCGCGACA AGAACAAGGT GTTCCTTGTC
GCCAGCGCGG GCAGCTCCGA CCTCACCGGC AAGGCCTGCA CGCCCAACAC GGTCCACTGG
ACCTACGACA CCTGGGCGCT GGCCAACGGC ACGGCCCGCG CCATGATCAA GCAGGGCGGC
ACGTCCTGGT ACTTCCTCAC CGCCGACTAT GCCTTCGGCC ACGCCCTGGA GCGCGACGCC
GCCGAGGTGG TGAAGGCCAA TGGCGGCCAG GTGATGGGTC GTGCGCTGGC GCCGTTCCAG
ACCTCGGACT TCTCCTCCTT CATCCTGCAG GCCCAGGGCA GCGGGGCAAA GGTGGTGGCG
CTGGCCAATT CCGGCGGCGA CACCATCAAT TCGGTTAAGC AGGCGGCCGA GTTCGGCCTC
AGCCAGAAGC AGAAGCTGGT GAGCCTGCTC ATCTTCCTGT CGGACATCCA CTCCCTCGGC
CTCAAGACGG CGCAGGGCCT GATGCTGACG AACGCCTTCT ACTGGAACCT CAACGACGGC
ACCCGCGCCT TCGGCAAGGC CTTTGGCGCC CGCAACGCTG GCCGCATGCC CACCATGAAC
CAGGCCGGCA CCTATGCCTC CACCCTGCAC TGGATGAAGG CCATCGCCGC CATGGACAAG
GCCAAGGCGC ACGATGGAGC CGCCGTGGTG GCGCAGATGA AGGCCATGCC CACGGACGAC
CCGCTGTTCG GCAAGGGCGA GATCCGCGCC GACGGCCGCA CCATTCACGA CATGTTCCTG
TGGCAGGTGA AGACGCCGGA GGAGTCCAAA GTGCCCTACG ACTATCTCAA GCTCATCGCC
ACCATCCCCG GCAACGAGGC GTTCCGACCC ATGTCGCCGG AGACCTGCCC CATGCTGAAG
AAGGCCGGCT GA
 
Protein sequence
MRAALAAATM LSCVVAAHAE DLPTFRIGVL NDQSSLYSDI AGPGSVTAAQ MAVEDFKPEK 
HGFKVEVVSA DHQNKADVGS SIARRWFDLD KVDAIVDVPT SSVALAVADI SRDKNKVFLV
ASAGSSDLTG KACTPNTVHW TYDTWALANG TARAMIKQGG TSWYFLTADY AFGHALERDA
AEVVKANGGQ VMGRALAPFQ TSDFSSFILQ AQGSGAKVVA LANSGGDTIN SVKQAAEFGL
SQKQKLVSLL IFLSDIHSLG LKTAQGLMLT NAFYWNLNDG TRAFGKAFGA RNAGRMPTMN
QAGTYASTLH WMKAIAAMDK AKAHDGAAVV AQMKAMPTDD PLFGKGEIRA DGRTIHDMFL
WQVKTPEESK VPYDYLKLIA TIPGNEAFRP MSPETCPMLK KAG