| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3340 |
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| Symbol | |
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| ID | 5423615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3715443 |
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| End bp | 3717266 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640882589 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001418226 |
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| Protein GI | 154247268 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.489198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCC GTGCGATCGG GGCGATGGGA GGCGATCCGC GCTTCACGGT GGCGTGCGGG
GCTCCGATCG CGTCGCGCGG TCCCGTTCTT GCTACGCGCG GCATGGATCT CACACGAGAC
AAGCCGAGCT GGAACCATGA CACAGCCCAC GCCCCGCCCC GGCCGCACCA TCGCCTGCCC
GACCTGCGAT GCCCTCACCA CCCTTGCCGC CGGCGAGGAC GCCAAGGCCG CCCGCTGCAC
CGCCTGCGGG GGACCGCTTT TCACCGGCCG GCCCATGGCC CTGACCGCCG CGCGCTTCGA
TGCCCACACC GGCCAGAGCG ACGTGCCGCT GGTGATCGAC TTCTGGGCCG ACTGGTGCGG
GCCGTGCAAG TCCATGGCTC CGGTGTTCGA GGCGCTGGCC GCCGAGTTCG AGCCCCATAT
CCGCTTCGCC AAGGTGGACA CCGACGCCGA GCGGGAGCTC GCTTCCTATT TCCGGATCAG
CTCCATCCCC ACCCTCAGCT TCATCCATGC CCACCGGGAG GTCGCCCGCG TGGCCGGCGC
CATGTTCGCC GGCGATCTGC GCCGCTGGCT CTACGACGCC CTGTCCCAGA CCGAGGAGAA
GGAGACCGCA GCGCCGGAGC CCGCGCCGGA AACGCCCTGA CCCTGGGGCA GGAAGACGGG
GTAGACTGGC GCGGGCGCAT GAGCGTCGCG CGGTCAGCGG CGCCGTGGGC GATGAATGGC
GGCCAATCGG ATCCCGGCAG CTCTCGTGTT GCCATTTCCG GCGTTGCCAA TATCCTGCCG
CTCCGCCCGA GTTGTGACAT GGTTGAACCC GACATCCTTT TCACCCGCAT CCTTGAGTTC
ATGCAGGGCG GGGCGCTCGC CCTCGACCGG CGGGGGCACG TGCGGGCGTT CAATCCGGCG
GCGGAGCGCA TGCTCGGCCT GTCGCCGGCG CGGGCCGGCG AGCAGCCGTT CGCGACCATG
CTGTTCGACG ATCCGGCCAA CGACGATTTC GCGCAGGCGT TGCTCGACGC GGTCTACGAC
GCCGGCACCA GCCACAGCCG CGACATCGCC TATTATCGCG ACGGCCAGCT CGCCTGGCTC
AACATGATCA CCTCGACCCT GTGGTCGCAT CGCACCGAGG CCGAGCCCGC CCGCAAGGTG
GGGGTGGTGG CGCTGTTCAT CGATATCACC GAGCGCAAGG TCGCCACGGA AGAGCTGCGG
CGCGCCAACG AGGAACTGGA GCGCCGGGTG CAGGAGCGCA CCCGGCAGCT GGCCGAGGCC
AATCTGAAGC TGCAGAGCGA GATTGCCGAG CGCGTGCGGG CGCAGGAGCG GATCGCCAAC
CTCGCGGAGC ACGACGTGCT CACCGCGCTG CCCAACCGGC GGCGCTTCGA GCGGCGCCTC
GCCGCCGCGG TCGAGCAGGG CGAGCCGTTC GCCGTGCTCT ATCTCGATCT CGACGGGTTC
AAGGCCATCA ACGACACCCA CGGGCACGAC ACCGGCGACG GCCTGTTGCA GAACGTGGCC
GAGCGGCTGC GGGCCTGCCT GCGCGAGGAC GACACGCTGG CGCGGCTCGG CGGCGACGAG
TTCGCCGTCA TCCTGGCATC CGCCCGCACG GCGGATGAGG TCCGGCCGGT TGCGGAACGG
ATCATCGACC ATGTGGGCGC GCCCTATGGT GCCGATGGCG ATCCCGAGCT GAAGATCAGC
GTCAGCGTCG GCATCGCGCT CTACCCGCAG GCCGGGCGCA CCCCGCGCGC GCTGCTCCAG
GCGGCGGACC GGGCCATGTA CGAAGCCAAG CGCGGCAGCC GCCAGCCGGT CCGCCCGCCG
GCACCCGACA GCAAGGAGGT CTAG
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| Protein sequence | MMRRAIGAMG GDPRFTVACG APIASRGPVL ATRGMDLTRD KPSWNHDTAH APPRPHHRLP
DLRCPHHPCR RRGRQGRPLH RLRGTAFHRP AHGPDRRALR CPHRPERRAA GDRLLGRLVR
AVQVHGSGVR GAGRRVRAPY PLRQGGHRRR AGARFLFPDQ LHPHPQLHPC PPGGRPRGRR
HVRRRSAPLA LRRPVPDRGE GDRSAGARAG NALTLGQEDG VDWRGRMSVA RSAAPWAMNG
GQSDPGSSRV AISGVANILP LRPSCDMVEP DILFTRILEF MQGGALALDR RGHVRAFNPA
AERMLGLSPA RAGEQPFATM LFDDPANDDF AQALLDAVYD AGTSHSRDIA YYRDGQLAWL
NMITSTLWSH RTEAEPARKV GVVALFIDIT ERKVATEELR RANEELERRV QERTRQLAEA
NLKLQSEIAE RVRAQERIAN LAEHDVLTAL PNRRRFERRL AAAVEQGEPF AVLYLDLDGF
KAINDTHGHD TGDGLLQNVA ERLRACLRED DTLARLGGDE FAVILASART ADEVRPVAER
IIDHVGAPYG ADGDPELKIS VSVGIALYPQ AGRTPRALLQ AADRAMYEAK RGSRQPVRPP
APDSKEV
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