| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3303 |
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| Symbol | truA |
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| ID | 5421639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3672682 |
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| End bp | 3673419 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640882550 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001418189 |
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| Protein GI | 154247231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0316618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.649703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCT ACAAGCTGAC CATCGAATAT GATGGCACCC CCTATGCCGG CTGGCAGATC
CAGGCCGACC AGCAGACCGT GCAGGGCGCG CTGGCGCAGG CATTCAAGCG TTTCTGCGGC
GAGGATGTGC ATGTGGCCGG CGCCGGGCGC ACTGATGCGG GGGTGCATGC CACCGGGCAG
GTGGCCCATG TCGACCTGTC CCGGCACTGG CGCAGCGACA CGGTGCGCGA CGCCATGACC
GCGCAGCTGC GTCCCCACCC CATCGCAGTT CTGAGCGCCG AAGAGGTGCC GGACAGCTTC
GACGCCCGCT TCTCCGCCAC CAAGCGGCAT TATCTCTACC GTATCATCAA TCGGCGGCCG
GACCTCGCCC TCGACCGGGA CCGGGCCTGG CGCATTCCGC AGAAGCTGGA CGCCCAGGCC
ATGCATGAGG CCGCCCAGCG GCTTTTGGGC AAGCACGATT TCTCCACCTT CCGCGCCGCC
GAATGCCAGG CCGCCTCGCC GCTCAAGACC CTGGACCAGC TGGACGTTTC CCGCTCCGGC
GACGAGATCC GCGTCATCAC CTCGGCGCGG TCCTTCCTGC ACCATCAGGT GCGCTCCATG
GTGGGCTCGC TGATGCGGGT GGGCGAAGGG CGCTGGAGCG CCGACGACCT GGAAGCCGCC
CTGAAAGCCG CCGACCGCAC CCGCTGCGGC CCCATGGCGC CCGCCGCCGG GCTCTATCTG
GCCGCCGTCA GCTATTGA
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| Protein sequence | MPRYKLTIEY DGTPYAGWQI QADQQTVQGA LAQAFKRFCG EDVHVAGAGR TDAGVHATGQ
VAHVDLSRHW RSDTVRDAMT AQLRPHPIAV LSAEEVPDSF DARFSATKRH YLYRIINRRP
DLALDRDRAW RIPQKLDAQA MHEAAQRLLG KHDFSTFRAA ECQAASPLKT LDQLDVSRSG
DEIRVITSAR SFLHHQVRSM VGSLMRVGEG RWSADDLEAA LKAADRTRCG PMAPAAGLYL
AAVSY
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