Gene Xaut_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3298 
Symbol 
ID5422780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3664283 
End bp3665050 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID640882545 
Productnucleotidyl transferase 
Protein accessionYP_001418184 
Protein GI154247226 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.998134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACA AGGCACAGGC CGGCCATTCG ACGGCCCAGA TTTCCGACAA CCGGATTTCC 
ACCGCAATGG TGCTCGCCGC CGGGATGGGC ACGCGCATGC GTCCGCTCAC CGACACGCGG
CCCAAGCCGC TGGTGGAGGT CTACGGCCGC CCTCTCATCG ATCATGTGCT CGGCCGCGTG
GCCGACGCCG GCATCCCCCA GGCGGTGGTC AACCTGCACC ATCACGCCGA CATGCTGGAG
GCGCATCTCA AGGCCCGGGG CGGGCCGCCG CAGATCGTCC TGTCCGACGA GCGCGGCCAG
TTGCTGGAGA CCGGCGGCGG CGTGCGCAAG GCGCTGCCGC TGCTTGGGCC GGACCCGTTC
CTCGCTATCA ATTCGGACAC CATCTGGATC GAAGGCATGC GGCCGAACCT GGTGCGGCTG
ATGGAGCATT TCGATCCGGA GCGGATGGAT GCGCTGCTGC TCCTCGCCTC GGCCGCCCAT
TCCATCGGCT ACGACGGCAT GGGCGACTTC CAGATGGACA AGCTCGGCCG CCTGACCCGT
CGGGCCGAGC GCACGGTCGT GCCGTTCGTC TATGCCGGGG CCGCCATCCT GAAGCCGGAG
CTGTTCGAGG GCACGCCTGA CGGCGCCTTC TCCCTCAACC GCATTTTCGA CAAGGCCGCC
GAGGCCGAGC GCCTGTTCGG CCTGCGCCTC GACGGCATCT GGATGCATGT GGGTACGCCC
GATGCCATCG CCCTCGCCGA GGAAGCGATC CAGAGGTCCA GCGACTGA
 
Protein sequence
MTDKAQAGHS TAQISDNRIS TAMVLAAGMG TRMRPLTDTR PKPLVEVYGR PLIDHVLGRV 
ADAGIPQAVV NLHHHADMLE AHLKARGGPP QIVLSDERGQ LLETGGGVRK ALPLLGPDPF
LAINSDTIWI EGMRPNLVRL MEHFDPERMD ALLLLASAAH SIGYDGMGDF QMDKLGRLTR
RAERTVVPFV YAGAAILKPE LFEGTPDGAF SLNRIFDKAA EAERLFGLRL DGIWMHVGTP
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