| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3260 |
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| Symbol | |
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| ID | 5422682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3621250 |
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| End bp | 3623340 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640882506 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001418146 |
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| Protein GI | 154247188 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.247594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.375198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA TCCAGCCATC CGGGTCATCG CCCGCCGCCC CCGCCCGCCG CCGGCTGCTG
CGGGTGGCGG GGGGCCTCGT GCTAGGGGCC GGGCTGCTGG CCGGCGGGGC TTGGGCGGGG
CTCCATCATC TGCGCGCCAA CGCGCCGCCG GCGCCGCAGG TGAAGGTGTC CGCCGAGGTG
GTGGACCGCG AGGGCCGCCT GCTGCGGCCA TTCGCGCTGC CCGATGGCCG CTGGCGGCTC
GCCGCCACGG CGGAGGACGT GGACCCGCGC CTCATCACCA TGATCCTGGC CTATGAGGAT
CGCCGGTTCC AGCAACACGG CGGCGTCGAT GCGCTGGCGC TGCTGCGGGC AGCCGGGCAG
GCGGCGGGAT CGCGGCGCGT GGTCTCGGGC GGCTCGACGC TGACCATGCA GGTGGCGCGG
CTGACCCTGC CACCGCGTCC GCGCACCCTT GCCGCCAAGC TCGCCCAGAT GCGCCGGGCG
CTGGAGCTGG AGGCCCATCT CTCCAAGCCC GAAATCCTCG GGCTCTACCT GACGCTCGCG
CCCTATGGCG GCAACATCGA GGGGGTGCGG GCGGCGGCGC TGACCTATTT CGGCAAGGAG
CCGCGCCGGC TCACCCTCGG CGAGGCGGCC TTGCTGGTGG CCCTGCCGCA GGCGCCGGAA
ACCCGCCGGC CGGATCGATT CCCGGCCCGG GCGCGGGCCG CGCGCGACCG GGTGCTGGAC
CGGCTCCTGT CCCAGGGCCT GCTTGTCGCC GACGAGGTGC GCGTGGCCAA GGCCGAGCCG
GTGCCTACGG CGCGGCGCTC CTTGCCGCAG CTCGCGCCCC ACCTCGCCGA GCAGATGGTG
GCGGAGCGGC CGGATCTCTC CCGCCACCTC TCGACCCTCG ACGCTCCGCT GCAGGAGAAG
CTGGAAGAGC TGGTTCGCGA GCGCACGCGG GCGCTGGGCC GCGGGCTCTC CTCCGCCGTG
GTGGTGATGG ACAATGACAG TGCCGAGGTG CGGGCCTATG TGGCCTCGGC GGATTTCCTC
GACAAGGAGC GGGCCGGCGC GGTGGACCTC GCCCGCGCGG TGCGCTCGCC GGGCTCGACG
CTGAAGCCCT TCATCTATGC CCTCGCCTTC GAGGACGGCA TCGCCCATCC CGAGACGCTG
ATCGAGGACC GGCCCGCCCG CTTCGGCGGC TGGCGGCCGG AAAATTTCGA CCGCAGCTTC
CAGGGCACCC TCTCCGTGCG CAAGGCGCTG CAACTGTCTT TGAACGTGCC CGCGGTGCGA
TTGCTGGATG CGGTGGGGCC GCAGCGCCTC GCCACCCGCC TGCAGCAGGC CGGGGCGCGG
CTGGAACTGC CGCCGGGCGC AGCACCGGCC TTGCCCATGG GGCTCGGCGG CGTGGGTATC
CGCCTCGTGG ACCTCACGAT GCTCTATGGC GCGCTGGCGC GGGGCGGCGA GGCGCATCCG
CTGGTGTTCC GCCGCGAGGG CGGCGCGGTG TCGGCGCCAC GCCGGTCGCG GCTCGTGGAT
CAGGTGGCGG CCTGGTATGT GGGCCAGTGC CTTCTGGGCA CGCCGGCGCC GGAGAATGCG
CTGGGTGGAC GCATCGCCTT CAAGACCGGC ACCTCCTACG GCTATCGCGA CAGCTGGGCC
ATGGGCTTCG ACGGGCGGCG CACCGTGGGC GTCTGGGTGG GCCGGCCGGA CGGACAGGCG
GTCCCCGACC TCACCGGCCG CGCGGCGGCC GCGCCGCTGC TGTTCGATGC CTTCGCCCGC
ATCGTCCGCA CCCCGGCGGG GCTCGGCCCG GCGCCGCGCG GGGCGGTGAT GGCGGCGAAT
GCTCGCCTTC CCGTGCCGCA GCGCCATTTC GGCCGCACCC GGCAGGAGCA GCCCTTGCAG
GTGGTCTATC CGCCGGACGG CGCACGGGTG TCCGGCGCCG AGGCGGAGAC GCTTGCGCTC
AAGGTGGATG GCGGCACCTT CCCGCTTACC CTGCTGATGG ATGGCCGCCC GGTGGCCCAG
GTGGAGGACC GGCGCACCCT GTTCTGGACC CCGCAGGGGC GGGGCTTTGC CCGCCTCACC
GTGATCGATG CGGTCGGGCT TTCCGACAGC GTGACGGTGC GGGTCGAGTA G
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| Protein sequence | MSAIQPSGSS PAAPARRRLL RVAGGLVLGA GLLAGGAWAG LHHLRANAPP APQVKVSAEV
VDREGRLLRP FALPDGRWRL AATAEDVDPR LITMILAYED RRFQQHGGVD ALALLRAAGQ
AAGSRRVVSG GSTLTMQVAR LTLPPRPRTL AAKLAQMRRA LELEAHLSKP EILGLYLTLA
PYGGNIEGVR AAALTYFGKE PRRLTLGEAA LLVALPQAPE TRRPDRFPAR ARAARDRVLD
RLLSQGLLVA DEVRVAKAEP VPTARRSLPQ LAPHLAEQMV AERPDLSRHL STLDAPLQEK
LEELVRERTR ALGRGLSSAV VVMDNDSAEV RAYVASADFL DKERAGAVDL ARAVRSPGST
LKPFIYALAF EDGIAHPETL IEDRPARFGG WRPENFDRSF QGTLSVRKAL QLSLNVPAVR
LLDAVGPQRL ATRLQQAGAR LELPPGAAPA LPMGLGGVGI RLVDLTMLYG ALARGGEAHP
LVFRREGGAV SAPRRSRLVD QVAAWYVGQC LLGTPAPENA LGGRIAFKTG TSYGYRDSWA
MGFDGRRTVG VWVGRPDGQA VPDLTGRAAA APLLFDAFAR IVRTPAGLGP APRGAVMAAN
ARLPVPQRHF GRTRQEQPLQ VVYPPDGARV SGAEAETLAL KVDGGTFPLT LLMDGRPVAQ
VEDRRTLFWT PQGRGFARLT VIDAVGLSDS VTVRVE
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