| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3170 |
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| Symbol | |
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| ID | 5425018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3512788 |
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| End bp | 3513228 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640882416 |
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| Product | NlpC/P60 family phage cell wall peptidase |
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| Protein accession | YP_001418057 |
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| Protein GI | 154247099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.402243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0218812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGT CCCTCACCCG CGCCGCCATC CTCAAAGAGG CGCGAAGCTG GATCGGCACG
CCCTATCTTC ATCGCGCCTC GCTGAAGGGG CAGGGGGCGG ACTGCCTTGG CCTCGTGCGC
GGGGTTTGGC GGGAGCTGGT CGGCCCCGAG CCGGAGGCCA TGCCCTCCTA TGCGCCGGAC
TGGGCTGAGG CCGGCCGCCG CGAGACCCTG GCGGAGGCGG CCGGGCGTTG CCTTGTCGCC
ATGCCGGTGG AGGCGGCGCA GCCCGGCGAC GTGCTGCTGT TCCGCTTCCG CGCCCATCTT
CCGGCCAAGC ACGCGGCGAT CCTCGCCGAG GGTGGGCGCA TGATCCACGC CTATGACGGC
GCGCACGTCT GCGAAGGCTA TCTGGCGCCC TGGTGGCGCC GCCGCCTCGC CTTCGCCTTC
GCCTTTCCGG GGATCGAATA G
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| Protein sequence | MTASLTRAAI LKEARSWIGT PYLHRASLKG QGADCLGLVR GVWRELVGPE PEAMPSYAPD
WAEAGRRETL AEAAGRCLVA MPVEAAQPGD VLLFRFRAHL PAKHAAILAE GGRMIHAYDG
AHVCEGYLAP WWRRRLAFAF AFPGIE
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