| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3164 |
|---|
| Symbol | |
|---|
| ID | 5424139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3508699 |
|---|
| End bp | 3509271 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640882410 |
|---|
| Product | gene transfer agent (GTA) orfg11 |
|---|
| Protein accession | YP_001418051 |
|---|
| Protein GI | 154247093 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0939369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0138275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CCGTCGATAT CGCCATCGAG GTGGACACCC GCAACGCCAA GGCGGCGCTG
GGGGACGTGG AGGTGTCGGC GAAGGGTTTT GCCTCGGCGC TGGCCTCCGC CTTCACCGGC
ATCGCCGTGC AGGGCAAGGA CCTCGGCAGC GTGCTGGAGC AACTGGCCGC GCGGCTTTCC
AATCTCGCCC TCACGGCGGC CTTGAAGCCG CTGGAAAGCG GGCTCTCCTC GCTGCTGTCG
GGCTCGGCCG GCGGGCTCGG CTTCGCCCAG GGCGGGGTGA TCTCGGAGGG ACGGGTGATG
CCGTTCGCGC GCGGCGGGGT GGTGGCGGCA CCCACCTATT TTCCGCTTGG CGGTTCCAGC
CTCGGCCTCA TGGGCGAGAA GGGGGCGGAG GCCATCCTGC CTTTGGCGCG CGGCGCCGAT
GGCAGGCTCG GCGTGCGCTC GGCCGAAGGG GCGGGACGCG CGGCGGTGAC GGTGAATGTT
TCCACGCCGG ACGTCGCCGG CTTCCGCCGT TCGGAGGCCT ATCTGTCGGG CCTTGTGGCG
CGGGCGGTGG CGCGCGGCCA GCGCGGGGCG TGA
|
|---|
| Protein sequence | MTETVDIAIE VDTRNAKAAL GDVEVSAKGF ASALASAFTG IAVQGKDLGS VLEQLAARLS
NLALTAALKP LESGLSSLLS GSAGGLGFAQ GGVISEGRVM PFARGGVVAA PTYFPLGGSS
LGLMGEKGAE AILPLARGAD GRLGVRSAEG AGRAAVTVNV STPDVAGFRR SEAYLSGLVA
RAVARGQRGA
|
|---|
| |