Gene Xaut_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3112 
Symbol 
ID5424875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3451404 
End bp3452420 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID640882358 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001417999 
Protein GI154247041 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.488218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.811654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTT GTCAGCTGAG GAGAGCTAAG CGAGGTTGCG CCCCGCTTCG GCCCGCCCGA 
AGACATCCCG AGGAAACCGG ACCCATGATG CGTTCCGCCA AAACCCGTCT TTTCGCCGCC
GCGCTCGCCG CGACCGTCTC CGTCGCGTCC GTCTCGGCGG CGCTCGCGCA GGGGGCCGCC
CCGGCCGCTC CCCCCGCCGC GACGCAGGCG GCGCCGGCCC CTGACACCGT GGTCGCGACC
GTCAACGGGA CGCCCATCCG CCAGAGCGAC GTGACCATCG CCCTCGAGGA CATCGGCGCC
GGCCTGCCGC CCCAGCTCCA GGGCGCGCAG CGGGAGGAAT ATGTCCTGTC CTTCCTCACC
GACATGACCC TGCTGGCCAA GGCCGCCGAG GCGCAGAAGC TCGACCAGTC GCCGGATTTC
CAGCAGCGCA TCGCCTATGC CCGCACCAAG GCGCTCATGG AAACGCTGAT GACCCAGGAA
GCCAAGAAGG CGGTTTCCGA AGAGGCCAAG CACAAGACTT ATGACGAGTT CGTCAAGTCC
GCGCCCGCCG AGGCGGAGGT CCGCGCCCGC CACATCCTGG TGGACGACGA GGCCAAGGCC
AAGGAAATCG CCAAGAAGGC CAAGGCCGGC GAGGATTTCG CCAAGCTCGC CAAGGACTAT
TCCAAGGACA GCGCCGAGGA CGGCGGGGAT CTCGGCTATT TCACCAAGGA CCAGATGGTG
CCCGAGTTCG CCGAGGCCGC CTTCAAGCTG GACAAGGGCC AGGTCTCCGA CCCGGTGAAG
AGCCAGTTCG GCTGGCATGT CATCAAGGTC GAGGACAAGC GCCAGAAGCC GGTTCCCACC
TATGATCAGG TGTCGGACCA GGTGGAGCAG TACCTCGTGC GCAAGGCCCA GGCGGACCTC
GTCACCAAGC TGCGCACCGA TGCCAAGATC GAGAAGGCCG CGGCTGCGGC GCCTGCTCCG
GCGGCGCCTG CTGCTCCCGC CGCGCCGGCT CCCGCGGCCG ACCCCGCCAA GAAGTGA
 
Protein sequence
MPSCQLRRAK RGCAPLRPAR RHPEETGPMM RSAKTRLFAA ALAATVSVAS VSAALAQGAA 
PAAPPAATQA APAPDTVVAT VNGTPIRQSD VTIALEDIGA GLPPQLQGAQ REEYVLSFLT
DMTLLAKAAE AQKLDQSPDF QQRIAYARTK ALMETLMTQE AKKAVSEEAK HKTYDEFVKS
APAEAEVRAR HILVDDEAKA KEIAKKAKAG EDFAKLAKDY SKDSAEDGGD LGYFTKDQMV
PEFAEAAFKL DKGQVSDPVK SQFGWHVIKV EDKRQKPVPT YDQVSDQVEQ YLVRKAQADL
VTKLRTDAKI EKAAAAAPAP AAPAAPAAPA PAADPAKK