Gene Xaut_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3109 
Symbol 
ID5424511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3449234 
End bp3449872 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content60% 
IMG OID640882355 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_001417996 
Protein GI154247038 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAT CGCAAGAGCC AGTCACCATC AAGAAATACG CCAACCGCCG TCTCTACAAC 
ACGGGCACGA GCACCTATGT GACCCTTGAA GACCTCGCCA ACATGGTGAA GGAGGGGGAG
GACTTCGTGG TGTATGACGC CAAGAACGGC GACGACATCA CTCACTCGGT GCTGACGCAG
ATTATCTTCG AGCAGGAAAA CAAGGGACAG AATCTTCTGC CCATCGCGTT TCTGCGCCAG
ATCATCCGCT TTTATGGCGA CAGCATGCAG ATGCTGGTGC CACGTTACCT CGAAGCCTCC
ATCGACAGCT TCACCAAAGA TCAGGGGAAG TTCCGCGAGC ACGTGGCCAA GACGATGACG
GGGCCGAGCT TCATCGGGCT CGACGATCAT GTGCGCCGCA ACATGGAAAT GTTTGAGCGC
GCTTTCCACA TGTTCCTGCC CTTCCCCAAG GGTGAGGAGC CGGCGGGAAC CGTTGCGCCG
ACGCCGCCCG CCCAGACGCC CGCCGTTCCG GTGGCCGAGC GCAGCGACGA CCTCGACGCG
CTCAAGCGCC AGATGGCTGA CATGCAGGCC AAGCTTGAGC AGTTGGTGCC CAAGAGCGAG
CCAAAGAGCG AGTCGAAGCC GGAAGGCTCG GATAGCTGA
 
Protein sequence
MAKSQEPVTI KKYANRRLYN TGTSTYVTLE DLANMVKEGE DFVVYDAKNG DDITHSVLTQ 
IIFEQENKGQ NLLPIAFLRQ IIRFYGDSMQ MLVPRYLEAS IDSFTKDQGK FREHVAKTMT
GPSFIGLDDH VRRNMEMFER AFHMFLPFPK GEEPAGTVAP TPPAQTPAVP VAERSDDLDA
LKRQMADMQA KLEQLVPKSE PKSESKPEGS DS