Gene Xaut_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3085 
Symbol 
ID5424345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3426733 
End bp3427770 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID640882331 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001417972 
Protein GI154247014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.14662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.424246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG TCGCGGATCG CGTGTTTTCC GGTGTGCAGC CCACGGGCAA CCTGCACCTC 
GGCAATTATC TCGGCGCCAT TAAGCGCTTC GTGGCGCTGC AGGAGAGCCA CGAGTGCATC
TATTGCGTGG TGGACCTCCA CGCCATCACC GTGTGGCAGG ACCCGGTGGA GCTGAAGCGC
CACATCCGCG AGGTTACCGC CGCCTTCATC GCCTGCGGCA TCGACCCCAA GGCGCACATC
GTGTTCAACC AGAGTCAGGT GTCGGGCCAC GCGGAATTGG CCTGGATCTT CAATTGCGTC
GCCCGCATGG GCTGGCTCAA CCGTATGACC CAGTTCAAGG AGAAGGCCGG CAAGGACCGC
GAGAACGTCT CGGTGGGCCT GTTCGCCTAT CCCGACCTGA TGGCGGCCGA CATCCTGCTC
TATCGCGCCA CCCACGTGCC GGTGGGCGAG GACCAGAAGC AGCACCTGGA GCTGACGCGC
GACATCGCGC AGAAGTTCAA CACGGATTTT GGCCCCTCTA TCGCCGCGCA CGGCCACGCG
GACGGCTACT TCCCCCTCAC CGAGCCGCTG ATCGCCGGGC CCGCCACCCG GGTGATGAGC
CTGCGCGACG GCGCCAAGAA GATGTCCAAG TCGGACCCCT CCGACTTCTC CCGCATCAAC
CTGACCGATG ACCGCGACAC CATCGCCGGC AAGGTGCGCA AGGCGAAGAC CGATCCCGAG
CCCCTGCCCA CCGAGGAAGA GGGCCTCAAG GGCCGTCCCG AGGCGGACAA TCTGGTCGGC
ATCTTCGCCG CGCTCTCCGA CCGCACCAAG GCCGATGTGC TGAAGGACTA CGGCACCGCC
CAGTTCTCTG CCTTCAAGGC GGCGCTGGTG GATCTGGCGG TGGAGAAGCT CGGCCCCATC
GGCGCCGAGA TGCAGCGCCT GATGGCGGAG CCCGCCGCGA TCGACGCCAT CCTCATCGAC
GGCGCGGATC GTGCCCGCGT CATCGCCGAC CAGACCATCG CCGAGGTGAA GGACATCGTT
GGCCTGGTGC GCGGCTGA
 
Protein sequence
MAAVADRVFS GVQPTGNLHL GNYLGAIKRF VALQESHECI YCVVDLHAIT VWQDPVELKR 
HIREVTAAFI ACGIDPKAHI VFNQSQVSGH AELAWIFNCV ARMGWLNRMT QFKEKAGKDR
ENVSVGLFAY PDLMAADILL YRATHVPVGE DQKQHLELTR DIAQKFNTDF GPSIAAHGHA
DGYFPLTEPL IAGPATRVMS LRDGAKKMSK SDPSDFSRIN LTDDRDTIAG KVRKAKTDPE
PLPTEEEGLK GRPEADNLVG IFAALSDRTK ADVLKDYGTA QFSAFKAALV DLAVEKLGPI
GAEMQRLMAE PAAIDAILID GADRARVIAD QTIAEVKDIV GLVRG