| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3083 |
|---|
| Symbol | |
|---|
| ID | 5424397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3422910 |
|---|
| End bp | 3424832 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640882329 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_001417970 |
|---|
| Protein GI | 154247012 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.169453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.477403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA ATCTACGCAA TTTCGCCCTT TGGGTGATCA TCGTCCTCCT GCTTCTTGCC
CTGTTCTCGC TGTTCAACAG CCCGGGGCAG CGCACGAACG CGAACGAGAT CTCCTTCTCG
CAGCTCCTCA ACGACGTTGA CGCCGGCAAG GTGCGCGAGG TCGTGATCGA GGGGCCGAAT
ATCACCGGCA CCTATTCCGA CCGTTCCGGC AGCTTCCAGA CCTACGCGCC GAACGATCCG
TCCCTCGTGC AGCGGCTGTA CGGCAAGGGC GTGCAGATCA CCGCCCGCGC GCCGTCGGAC
AATGTGCCGT GGTTCGTGAG CCTGCTGGTG TCCTGGCTGC CGTTCCTGGC CCTCATCGGC
GTGTGGATCT TCCTGTCGCG CCAGATGCAG GGCGCTGGCG GCAAGGCCAT GGGCTTCGGC
AAGAGCCGCG CCAAGCTGCT GACCGAGGCG CACGGCCGCG TCACCTTCGA CGACGTGGCC
GGCATCGACG AGGCCAAGAG CGACCTCACC GAGATCGTGG ACTTCCTGCG TGACCCGCAG
AAATTCCAGC GCCTCGGCGG CCGCATCCCG CGCGGCGTGC TGCTGGTCGG CCCTCCTGGT
ACCGGCAAGA CGCTGCTGGC CCGCGCCATC GCCGGCGAGG CCAACGTGCC GTTCTTCACC
ATCTCCGGCT CGGACTTCGT GGAGATGTTC GTGGGCGTCG GCGCCAGCCG CGTGCGCGAC
ATGTTCGAGC AGGCGAAGAA GAACGCGCCC TGCATCATCT TCATCGACGA GATCGACGCG
GTGGGTCGCC ATCGCGGCGC CGGCCTGGGC GGCGGCAATG ACGAGCGTGA GCAGACCCTC
AACCAGCTGC TGGTGGAGAT GGACGGCTTC GAGGCGAACG AGGGCATCAT CCTCATCGCC
GCCACCAACC GTCCGGATGT GCTCGATCCG GCGCTGCTGC GTCCCGGCCG CTTCGACCGC
CAGGTCATCG TGCCGAACCC GGACGTGGTG GGCCGCGAGC AGATCCTGAA GGTGCACGCC
CGCAAGATCC CGGTCGCCCC GGACGTGAAC CTGAAGACCA TCGCCCGCGG CACCCCTGGC
TTCTCCGGCG CGGACCTTGC CAACCTCTGC AACGAGGCGG CGCTGATGGC GGCCCGGCGC
AACAAGCGCA TGGTCACCAT GGCCGAGTTC GAGGACGCCA AGGACAAGGT CATGATGGGC
GCGGAACGCC GCTCCCTCGT CATGACCGAG GAAGAGAAGA TGCTGACCGC CTATCACGAG
GGCGGCCACG CCCTCGTGGC GCTGAAGGTG CCGGCCACCG ACCCGGTGCA CAAGGCCACC
ATCATTCCGC GTGGCCGGGC CCTCGGCATG GTCATGCAGC TGCCCGAGCG GGACAAGCTT
TCCATGTCCT ACGAGCAGAT GACCTCGCGC CTTGCCATCA TCATGGGCGG GCGCGTGGCG
GAAGAGCTGA TCTTCGGCCA CGACAAGGTG ACCTCCGGCG CCGCCTCCGA TATCGAGCAG
GCGACCCGCC TCGCCAAGCT GATGGTGACG CGCTGGGGCT TCTCGGCGGA TCTCGGCACC
GTGGCCTATG GCGACAACCA GGACGAGGTG TTCCTGGGCA TGTCGGTGTC GCGCCAGCAG
AACGTGTCCG AGGCCACCGC CCAGACCATC GACCGCGAGG TGCGTCGCCT CGTGGACGAG
GGCCACGCCG AGGCCAAGCG CATCCTCACC GAGCACCAGG ACGAACTTGA GATCCTGGCG
CGCGGCCTGC TGGAATACGA GACGCTCTCG GGCGACGAGA TCATCGACCT TCTGGACGGC
AAGACGCCGA ACCGGGAAAG CGTGATCGAG CCGTCGAACC CGCGCAGCTC GGGCATTCCC
ACCACCAAGC GCCCCCGTCA GGGCGGCGCC GGCGGCTCCA TCGAGCCCCA GCCCCAGGCC
TGA
|
|---|
| Protein sequence | MNANLRNFAL WVIIVLLLLA LFSLFNSPGQ RTNANEISFS QLLNDVDAGK VREVVIEGPN
ITGTYSDRSG SFQTYAPNDP SLVQRLYGKG VQITARAPSD NVPWFVSLLV SWLPFLALIG
VWIFLSRQMQ GAGGKAMGFG KSRAKLLTEA HGRVTFDDVA GIDEAKSDLT EIVDFLRDPQ
KFQRLGGRIP RGVLLVGPPG TGKTLLARAI AGEANVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKNAP CIIFIDEIDA VGRHRGAGLG GGNDEREQTL NQLLVEMDGF EANEGIILIA
ATNRPDVLDP ALLRPGRFDR QVIVPNPDVV GREQILKVHA RKIPVAPDVN LKTIARGTPG
FSGADLANLC NEAALMAARR NKRMVTMAEF EDAKDKVMMG AERRSLVMTE EEKMLTAYHE
GGHALVALKV PATDPVHKAT IIPRGRALGM VMQLPERDKL SMSYEQMTSR LAIIMGGRVA
EELIFGHDKV TSGAASDIEQ ATRLAKLMVT RWGFSADLGT VAYGDNQDEV FLGMSVSRQQ
NVSEATAQTI DREVRRLVDE GHAEAKRILT EHQDELEILA RGLLEYETLS GDEIIDLLDG
KTPNRESVIE PSNPRSSGIP TTKRPRQGGA GGSIEPQPQA
|
|---|
| |