Gene Xaut_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3075 
Symbol 
ID5424233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3414132 
End bp3415142 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID640882321 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001417962 
Protein GI154247004 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.25156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA AGGTGGCCAT CAACGGTTTC GGTCGCATCG GGCGTAACGT TCTGCGCGCC 
ATCATCGAAT CGGGTCGGAC CGACATCGAG GTGGTGGCGA TCAACGATCT CGGCCCGGTG
GAGACGAACG CCCACCTGTT CCGCTTCGAC AGCGTGCACG GCCGCTTCTC CGGCGAGGTC
AAGGTTGCCG GCGATACCAT CGACGTGGGC CGCGGCCCCA TCAAGGTCAC CGCGGTGCGC
GATCCCGCCC AACTGCCCCA CAAGGATCTG GGCGTGGACA TCGCGCTCGA GTGCACCGGC
ATCTTCACCG CCCGCGACAA GGCGGCCGCG CACCTCGCGG CCGGTGCCCG GCGCGTGCTG
GTCTCGGCCC CGGCCGAGGG CGCCGACCTG ACGGTGGTCT ACGGTGTGAA CCACGACAAG
CTCACCTCCG AGCACCTCGT GGTCTCCAAC GCCTCCTGCA CCACCAACTG TCTCGCCCCC
GTCGCGAAGG TCCTGAATGA TGCCGTCGGC ATCGAGAAGG GCTTCATGAC CACGATCCAC
TCCTACACCG GCGACCAGCC GACGCTGGAC ACCATGCACA AGGACCTCTA CCGCGCCCGC
GCGGCGGCCA TGTCCATGAT CCCCACGTCC ACCGGCGCCG CCAAGGCGGT GGGCCTGGTC
CTGCCCGAGC TGAACGGCAA GCTGGACGGC ACCTCCATCC GCGTGCCGAC CCCGAACGTC
TCGGTGGTGG ACTTCAAGTT CATCGCCAAG CGCGCCACCA CCAAGGACGA GATCAACGCC
GCCGTCCTCG CCGCGGCTGC GTCCGGTCCG CTGAAGGGCA TTCTCGGCAC CACCGACCAG
CCCAACGTCT CCATCGACTT CAACCACGAT CCGCACTCCT CCACCCTGCA CCTCGACCAG
ACCAAGGTCC TGGAAGGCAC TCTGGTGCGC GTGCTGTCCT GGTATGACAA CGAGTGGGGC
TTCTCCAACC GCATGGCCGA CACTGCAGTC GCCATGGGCA AGCTCGGTTG A
 
Protein sequence
MSVKVAINGF GRIGRNVLRA IIESGRTDIE VVAINDLGPV ETNAHLFRFD SVHGRFSGEV 
KVAGDTIDVG RGPIKVTAVR DPAQLPHKDL GVDIALECTG IFTARDKAAA HLAAGARRVL
VSAPAEGADL TVVYGVNHDK LTSEHLVVSN ASCTTNCLAP VAKVLNDAVG IEKGFMTTIH
SYTGDQPTLD TMHKDLYRAR AAAMSMIPTS TGAAKAVGLV LPELNGKLDG TSIRVPTPNV
SVVDFKFIAK RATTKDEINA AVLAAAASGP LKGILGTTDQ PNVSIDFNHD PHSSTLHLDQ
TKVLEGTLVR VLSWYDNEWG FSNRMADTAV AMGKLG