Gene Xaut_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3072 
Symbol 
ID5424795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3410465 
End bp3410974 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID640882318 
ProductPol-Pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001417959 
Protein GI154247001 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.314971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.495384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC GCCCCACATT CTCCCCGTCC GATCCGCACC TCAAACTTGC CGGCCGGCTG 
ATCCCCGGCG GCCACGCGCT GCATGTGCGC GTGTATTACG AGGACACGGA TTTCTCCGGC
ATCGTCTACC ACGCCAATTA TCTGAGATTC ATGGAGCGCG GCCGCTCCGA CTACATGCGG
CTGCTGGGCG TGTTCCAGGG CGAGCTGTTC GAGCAGGCGG CGGCCGAGGC GCCGGGCTTT
CACTTCGTCG TCCGCTCCAT GCAGATCGAC TTCCGCAAGC CCGCTCGCAT CGACGACGTG
CTGGAGGTGG TGACCCTCTC CAAGGAGGTG GCCGGCGCGT CCATCACCCT GTTGCAGCAG
GTGAAGCGGG ACGGCGAGGT GCTGGTGTCC GCCACCGTGC GCGTGGCCTT CGTCTCGGAG
GGGCGGGCCA AGCGCATCCC CGATGCGCTG CGCCAGGCGA CGCTTCAGGA TGCCCGCGCC
ACCGAAGCCA TTGGCGAAAG CCAGAGCTGA
 
Protein sequence
MVERPTFSPS DPHLKLAGRL IPGGHALHVR VYYEDTDFSG IVYHANYLRF MERGRSDYMR 
LLGVFQGELF EQAAAEAPGF HFVVRSMQID FRKPARIDDV LEVVTLSKEV AGASITLLQQ
VKRDGEVLVS ATVRVAFVSE GRAKRIPDAL RQATLQDARA TEAIGESQS