| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3069 |
|---|
| Symbol | ruvB |
|---|
| ID | 5424792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3408140 |
|---|
| End bp | 3409171 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640882315 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001417956 |
|---|
| Protein GI | 154246998 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.672447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.509611 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC GCCTCCTCTC GGGCGAGAAG CGCGGCGAAG ATGCCGCCGA TTCGACGCTG
CGGCCCCAGC TCCTCAAGGA GTTCGTGGGC CAGGCGCAGG CGCGCGCCAA TCTGGAAGTG
TTCATCAAGG CGGCCCGCGC CCGCGGCGAG GCGCTGGACC ACGTGCTGTT CGTAGGTCCG
CCCGGCCTCG GCAAGACCAC GCTGGCCCAG ATCATGTCGC GGGAGATGGG GGTGGGCTTC
CGCTCCACCT CCGGCCCGGT GATCGCCAAG GCAGGGGACC TTGCCGCCAT CCTCACCAAT
CTGGAAGAGC GCGACGTGCT CTTCATCGAC GAGATCCACC GCCTCGCGCC GGCGGTGGAG
GAAATCCTCT ATCCGGCCAT GGAGGATTAT GAGCTGGACC TCGTCATCGG CGAAGGGCCG
GCGGCGCGCT CGGTGAAGAT CGCCCTGCCC AAGTTCACGC TGGTGGGCGC CACCACGCGC
TCGGGCCTGC TCACCACGCC GCTGCGCGAC CGCTTCGGCA TTCCGGTGCG GCTGCAATTC
TACACCGTGG AGGAACTGGA GAAGATCGTG GTGCGCGGGG CGCGGGTGCT GGGCATCGCC
ATCGCCCCGG ACGGCGCCAC CGAGATCGCC CGCCGCGCGC GGGGAACGCC GCGCATCGCC
GGCCGGCTGC TGCGGCGGGT GCGCGACTTC GCCCTGGTGG CCGAAGCCGA GCGCATCGAC
CGCAAGGTGG CCGACCGGGC GCTGCTGGCG CTGGAGGTGG ACGCCGCCGG ACTCGATGCC
ATGGATCGGC GCTATCTCAC CGTCATCGCC GATTATTACG GCGGTGGTCC GGTGGGGGTG
GATACGCTCG CGGCTGCGTT GTCCGAGCCG CGCGACGCCA TCGAGGAGAT CGTGGAGCCG
TTCCTGGTGC AGCAGGGCTT CATCCAGCGT ACGCCGCGCG GGCGGATGCT GACTGCTACC
GCCTTCCGCC ATCTTGGACT GCCGGAACCG GTTGTGGCCA GGCCCATGCC CCTGTTCGAC
GAGGGCGAGT AG
|
|---|
| Protein sequence | MNTRLLSGEK RGEDAADSTL RPQLLKEFVG QAQARANLEV FIKAARARGE ALDHVLFVGP
PGLGKTTLAQ IMSREMGVGF RSTSGPVIAK AGDLAAILTN LEERDVLFID EIHRLAPAVE
EILYPAMEDY ELDLVIGEGP AARSVKIALP KFTLVGATTR SGLLTTPLRD RFGIPVRLQF
YTVEELEKIV VRGARVLGIA IAPDGATEIA RRARGTPRIA GRLLRRVRDF ALVAEAERID
RKVADRALLA LEVDAAGLDA MDRRYLTVIA DYYGGGPVGV DTLAAALSEP RDAIEEIVEP
FLVQQGFIQR TPRGRMLTAT AFRHLGLPEP VVARPMPLFD EGE
|
|---|
| |