| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3067 |
|---|
| Symbol | ruvA |
|---|
| ID | 5424267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3406724 |
|---|
| End bp | 3407341 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640882313 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_001417954 |
|---|
| Protein GI | 154246996 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.32025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.444921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAA AGTTGAAGGG CGTCGTGGAC ACGCTGGAGG AGGACCATGT GATCCTCGAT
GTCCATGGCG TGGGCTATCT CGTGCACTGT TCCGGCCGCA CGCTCTCGGC CCTGCCGCGG
GCGGGAGAGG CTGCGGCGCT GTTCATCGAG ACCCATGTGC GCGAGGACCA GATCCGCCTG
TTCGGCTTCA GCTCGGCGGC GGAACGGGAC TGGTTCCGCC TGCTGCAGGG CATCCAGGGC
ATCGGCACCA AGACCGCCCT GGCCGTGCTC TCCACTTTGA GCGCCTCGGA GCTGACGCAG
GCCATCGCGC TGGGCGACAA GACCACGGTG GCGCGGGCTC CGGGGGTGGG GCCGCGGGTG
GCGACGCGCA TCATCACCGA GCTGAAGGAC AAGATGCCGG GCTTTTCCGC CTCCGAACCG
CTGGCGGCTC AGCTCGGCGG CGGCGGTGTC GCCTCGGCGC AGGGGGGCGC GGCGGCGGAT
GCGGTCTCGG CCCTGGTCAA CCTCGGCTAT GGCGTGCCGC AGGCCAACGC TGCCATCGCC
GCCGCCCTGC GCGGCGCGGG GGAGGGGGCC AAGACCGAGG TTCTGATCCG GCTGGGGCTG
AAGGAACTGG CGAAGTAA
|
|---|
| Protein sequence | MIGKLKGVVD TLEEDHVILD VHGVGYLVHC SGRTLSALPR AGEAAALFIE THVREDQIRL
FGFSSAAERD WFRLLQGIQG IGTKTALAVL STLSASELTQ AIALGDKTTV ARAPGVGPRV
ATRIITELKD KMPGFSASEP LAAQLGGGGV ASAQGGAAAD AVSALVNLGY GVPQANAAIA
AALRGAGEGA KTEVLIRLGL KELAK
|
|---|
| |