Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3056 |
Symbol | |
ID | 5424779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 3395637 |
End bp | 3396989 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640882302 |
Product | beta-propeller repeat-containing to-pal system protein TolB |
Protein accession | YP_001417943 |
Protein GI | 154246985 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0557578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.412166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGT TCGGACGGCC GGCCATGCTC GGGATGGGAC GCCGGGCATT CATCAAGACC GGACTTGCCG CCGCGAGCCT CGCCGGCCTC GGTGCGGGGC TGGGCACTGG CCCGGCGGGT GCCGCGCAGC CGCGCATCGA CCTCACCCCC GGTGCCTTCA AGCCCATCCC AATCGCCATC ACCGACCTGC TCGGCGAGGT CGAGATTGGC CGCAACATTT CCGGCGTCAT CACCGCCGAC CTGCGGCGCT CGGGCCTGTT CGCGCCCATC GATCCCAAGG CGTTCGTGGA GCAGATCACC AATCCCGATA CGCCGCGCTT CCAGGACTGG CGCGTCATCA ATGCCCAGGC GCTGCTCACC GGCCGGGTCA CCCGGCAGGC GGACGGGCGC TTCCAGGTGG TGTTCCGCCT GTGGGACGTG TTCGCCGGCC AGCAGCTCGC CGCCCAGCAG TTCGTCGCCC AGCCCGACAA CTGGCGCCGC ATCGCCCACA TCATCGCCGA CGCCATCTAT GAGAAGATGA CCGGCGAAAA GGGCTATTTC GACACCCGCA TCGTGTTCGT GGACGAGAGC GGCCCGAAGG AGCGGCGGGT CAAGCGCCTC GCCATCATGG ACCAGGACGG CGCCAACGTG AGCTATCTGT CGCGCGGCGA CGGCCTCGTG CTCACCCCGC GCTTCTCGCC CACCAGCCAG GAAATCACCT ACATGTCCTA TGGGGCGGGT GACCCCAAGG TGTTCCTTCT GAACATCGAG ACCGGCCAGC GCGAGATCGT CGGCAACTTC CCGGGCATGA GCTTCTCGCC ACGCTTCGCC CCGGACGGGC AGCGGGTGAT CATGAGCCTG CAGCAGGGCG GCAATTCCAA CATCTTCGTC ATGGACCTGC GCTCGCGCGC CACCACCCGC CTCACCGACA CCGCCGCCAT CGACACCGCC CCCTGCTATT CGCCGGACGG CCGGCAGATC TGCTTCGAGA GCGATCGCGG CGGCACCTCG CAGATCTATG TGATGAATGC CGACGGCTCC GGCGCGCGGC GCATCTCGTT CGGCAATGCG CGCTACTCGA CCCCGGTGTG GTCGCCCAAG GGCGACTGGA TCGCCTACAC CCGCCAGGCC GAAGGCCGCT TCGCCATCGG CGTGATGCGC ACCGACGGCT CGGGCGAGCG CGTGCTCACC GAGGGCTACC ACAACGAGGG GCCGACGTTC GCGCCCAACG GCCGCGTCAT CATGTTCTTC CGCGATCCCG GCGGCGCCTC CGGGCCGTCG CTCTATTCGG TGGACGTGAC CGGCTACAAC GAGCAGCGCG TGCCCACCCC GAGCTATGCC TCTGACCCCG CCTGGTCGCC CCTGCGCTCC TGA
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Protein sequence | MNGFGRPAML GMGRRAFIKT GLAAASLAGL GAGLGTGPAG AAQPRIDLTP GAFKPIPIAI TDLLGEVEIG RNISGVITAD LRRSGLFAPI DPKAFVEQIT NPDTPRFQDW RVINAQALLT GRVTRQADGR FQVVFRLWDV FAGQQLAAQQ FVAQPDNWRR IAHIIADAIY EKMTGEKGYF DTRIVFVDES GPKERRVKRL AIMDQDGANV SYLSRGDGLV LTPRFSPTSQ EITYMSYGAG DPKVFLLNIE TGQREIVGNF PGMSFSPRFA PDGQRVIMSL QQGGNSNIFV MDLRSRATTR LTDTAAIDTA PCYSPDGRQI CFESDRGGTS QIYVMNADGS GARRISFGNA RYSTPVWSPK GDWIAYTRQA EGRFAIGVMR TDGSGERVLT EGYHNEGPTF APNGRVIMFF RDPGGASGPS LYSVDVTGYN EQRVPTPSYA SDPAWSPLRS
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