| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3011 |
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| Symbol | |
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| ID | 5423988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3350628 |
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| End bp | 3351173 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640882257 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_001417898 |
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| Protein GI | 154246940 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTCGCT TCGGCTATGT CATGGTGACG TATTTCGTGA CGATGGGCGT CGCCGTCGCC
GCTTTCATCC CGATCGCGCC GCGCCTCGTC TGGAATGCCT CGGCCAGCGT GCCGGTCGGT
CTCTACGACC TTGGCCCGAC GCGCCATTTG GAAGTCGGCG ATCTCGTCGC GGCCATGCCA
GACAAGCCAC TGTCCGACTT CATGGTCGCT CGCGGCTATA TCGGCCGCGA CGTGCCGCTG
ATGAAGCGCG TCATGGGGCT TCCCGGTCAA CGGGTCTGCC GCACCGGCAA CACCATCACC
GTCGATGCCG TGCCGCTCGG CGAGGCGCTC GACCGCGACC GACTCGGCCG CCCATTGCCC
GTCTGGCAAG GCTGCCGCCG CATCGCGGAT GGCGACATCT TCCTCATGAA TCCCGACGCG
CACGACAGTC TGGACGGTCG CTACTTCGGC CCGCTTCCGA CGCGCGCGGT CATCGGCAAG
GCGACGCCGC TCTACACCGA CGAGGCCGGC GACGGCCGCT TCGTCTGGCG CGCGACGGCA
CGCTGA
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| Protein sequence | MTRFGYVMVT YFVTMGVAVA AFIPIAPRLV WNASASVPVG LYDLGPTRHL EVGDLVAAMP
DKPLSDFMVA RGYIGRDVPL MKRVMGLPGQ RVCRTGNTIT VDAVPLGEAL DRDRLGRPLP
VWQGCRRIAD GDIFLMNPDA HDSLDGRYFG PLPTRAVIGK ATPLYTDEAG DGRFVWRATA
R
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