| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3006 |
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| Symbol | |
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| ID | 5423920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3343381 |
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| End bp | 3345372 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640882252 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001417893 |
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| Protein GI | 154246935 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA GCCGTGTCCT TTGGGGACAA GTCGCAATCG TCCTCGCCAT CGTGCTCACC
GCGATATGGT GCGCAACGGA ATGGACGGCA TGGCGTCTCG GGTTTCAGGC GCAGCTCGGA
CAGCCGTGGT TCGTGGTAGC GGGTTGGCCG GTCTATTACC CGCCGATCTT CTTCTGGTGG
TGGTTCTCGT TCGACGCCTA TGCGCCGTCG ATTTTCCTCG AAGGCGCCAT GATCGCGGTA
TCGGGCGGCT TGGTCTCGAT CGTCGTCGCC ATCACCCTGT CTGTGATCCG AGCGCGGGAC
GCGAAGAACG TCGTCACCTA TGGCTCGGCG CGCTGGGCCG AGCTGAACGA GATCAAGGCA
GCCGGATTGC TCGGCGCGGA CGGCGTGGTG CTTGGTCGCT ATGACCGCGA CTATCTCCGC
CACGATGGCC CGGAGCATGT GCTGTGCTTC GCGCCGACCA GATCGGGCAA GGGCGTCGGT
CTCGTCGTAC CGACCCTGCT GACCTGGCCC GGCAGCACGA TCATCCATGA CATCAAGGGG
GAGAATTGGG GGCTGACCGC CGGCTTCCGC TCTCGGCACG GCCGCGTGCT GCTGTTCGAT
CCGACCAATC CCACCTCGTC GGCCTATAAT CCGCTGCTCG AGGTGCGGCG CGGCGACAAA
GAAGTCCGCG ACGTGCAGAA CATCGCCGAT ATCCTCGTCG ATCCCGAAGG TGCTTTGGAC
AAAAGGAACC ATTGGGAAAA GACCAGCCAT TCGCTTCTGG TCGGCGCGAT CCTGCATGTT
CTCTACGCGG AAGCCGACAA GACGCTGGCG GGCGTCGCCA ATTTCCTGTC CGATCCGAAG
CGACCCGTCG AGGCGACGTT GCGCGCCATG ATGAATACCC CGCATCTCGG CGAGGCCGGC
GTGCATCCCG TCATCGCGTC GTCGGCGCGC GAGCTGCTGA ACAAGAGCGA CAACGAACGA
TCGGGCGTGC TGTCGACCGC CATGTCGTTC CTCGGCCTCT ATCGTGATCC CGTGGTGGCG
AAAGTGACGG CGCGCTGCGA CTGGCGCATC GCCGATCTCG TCTCGGGCGA CAGGCCCGTC
AGCCTCTACC TCGTGGTGCC GCCGTCGGAC ATCAACCGCA CCAAACCGCT GATCCGCCTG
CTGCTCAATC AGGTCGGGCG GCGCTTGACC GAAGACCTGA CGACCTCGGC CAATCGCCAC
CGGCTGCTGT TGATGCTCGA CGAGTTTCCG GCGCTGGGAA GGTTGGATTT CTTCGAGTCC
GCGCTGGCTT TCATGGCGGG CTACGGGATC AAGAGCTTTT TGATCGCGCA GAGCCTCAAC
CAGATCGAAA AGGCGTATGG CGCCAACAAC AGCGTGCTCG ACAACTGCCA TGTCCGCGTC
GCCTTCGCCA CCAACGACGA GCGCACAGCC AAGCGCGTGT CGGACGCATT GGGCACCGCG
ACCGAGATGC GCGATTCCAC CAACTATGCC GGCCACCGGC TTTCGCCCTG GCTGGGGCAT
CTCATGGTGT CGCGGCAGGA GACGGCCAGG CCGTTGCTTA CTCCCGGCGA GGTCATGCAG
CTTCCACCCG CCGATGAATT GCTGCTGGTC GCGGGCGTCC CGCCGGTGCG CGCGAAGAAG
GCCCGCTACT ACGAGGATGC GCGGTTCCGT GAGCGGATCA TGCCGCCGCC GAAATCCGCA
GCCACAAAAG GCTCGGCCAA GCCGCCCACC GATGATTGGT CCGCACTGGC GATCCCGACC
GCATCGGCCG GCGTAACGGC CAATACCGAA ACCGGCCCGA TCACCGATCC GGCCAATGCA
GGTATCCGCC GCGAGCCGGA ATTGCCGGAG CATGAAGAGA TCGCACCCCC CGAGCGTCCG
GCAATTGGAG AGTTCGCCCT GCTCGACGAC GAGCCGGACA CGGACGCCGC CAAGGCCCGC
AGCCTTCGTC GTCAGGTCAC ATCTATCGCC CGGCAGGCGA CAATGGACCC GGCCGATGGC
ATCGAGTTGT AG
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| Protein sequence | MSGSRVLWGQ VAIVLAIVLT AIWCATEWTA WRLGFQAQLG QPWFVVAGWP VYYPPIFFWW
WFSFDAYAPS IFLEGAMIAV SGGLVSIVVA ITLSVIRARD AKNVVTYGSA RWAELNEIKA
AGLLGADGVV LGRYDRDYLR HDGPEHVLCF APTRSGKGVG LVVPTLLTWP GSTIIHDIKG
ENWGLTAGFR SRHGRVLLFD PTNPTSSAYN PLLEVRRGDK EVRDVQNIAD ILVDPEGALD
KRNHWEKTSH SLLVGAILHV LYAEADKTLA GVANFLSDPK RPVEATLRAM MNTPHLGEAG
VHPVIASSAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA KVTARCDWRI ADLVSGDRPV
SLYLVVPPSD INRTKPLIRL LLNQVGRRLT EDLTTSANRH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGI KSFLIAQSLN QIEKAYGANN SVLDNCHVRV AFATNDERTA KRVSDALGTA
TEMRDSTNYA GHRLSPWLGH LMVSRQETAR PLLTPGEVMQ LPPADELLLV AGVPPVRAKK
ARYYEDARFR ERIMPPPKSA ATKGSAKPPT DDWSALAIPT ASAGVTANTE TGPITDPANA
GIRREPELPE HEEIAPPERP AIGEFALLDD EPDTDAAKAR SLRRQVTSIA RQATMDPADG
IEL
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