| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3001 |
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| Symbol | |
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| ID | 5423569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3338681 |
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| End bp | 3341119 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640882247 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001417888 |
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| Protein GI | 154246930 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC TCGCCGAATA TCGCAACAAG AACACCCGGC TCGCCGATTT CCTGCCCTGG
GCGGCGCTCG TCGGCACCGG CGTCGTGCTC AACAAGGATG GCAGCTTTCA ACGCACGGCG
AGGTTCCGGG GGCCGGATCT CGATTCCGCG GTGCCGGCTG AACTGGTCGC CGTCGCCGGT
CGCCTCAACA ACGCTTTCCG CCGCCTCGGC TCGGGTTGGG CGATCTTTGT CGAGGCGCAG
CGCCATCCCT CGAACCGCTA TCCCGACAGC AGTTTTCCCG ATGCCGCTTC CGCCCTGGTC
GACGCCGAGC GCAAGGCTGA CTTCGAGGAG GCCGGGGCGC ATTTCGAGTC CAGCTACTTC
CTGACCTTCA CCTACCTGCC GCCGGCCGAA GACGCGGCTC GCGCCGAAAG CTGGCTCTAT
GAGGGCCGTG ACCAGAAGGG GCTCGATCCG CACGAAGCGA TGGGCGGTTT CACCGACCGC
ACCGACCGGC TGCTGCGCCT GGTCGAAGCC TTCATGCCGG AATGCCGCTG GCTCGATGAC
GGCGAGACGC TGACCTATCT GCATGGCTGC GTTTCCACGC ACCGGCACCG CGTCCGGGTG
CCCGAAACCC CGATTTATCT CGACGCGCTG CTGGCCGACC AGCCGCTGAC CGGCGGGCTG
GAGCCTCGCC TCGGACAATC GCACTTGCGC GTGCTCACCG TCACCGGTTT CCCCACTGCG
ACCACGCCCG GCCTGCTCGA CGAGCTGAAT CGGCTCGCCT TTCCCTATCG GTGGAGCACC
CGCGCGATCC TGCTCGACAA AACCGACGCG ACAAAGCTGC TGACCAAGAT CCGGCGGCAA
TGGTTCGCCA AGCGCAAATC CGTCGCGGCG ATCCTCAAGG AGGTGATGAC CAACGAGGCG
TCCGTTCTCG TGGACACCGA TGCGTCGAAC AAGGCCGCGG ACGCCGATCT CGCGCTACAG
GAACTCGGCG CCGACTATGC CGGTATCGCC TATGTCACCG CGACGGTGAC GGTGTGGGAC
GCCGATCCGC GCACCGCTGA CGAGAAGCTG CGCCTGGTCG AGAAGGTCAT TCAGGGCCGC
GACTTCACGG TGATGGCCGA GACCATCAAC GCGGTGGACG CCTGGCTCGG CAGCCTGCCA
GGGCATGTCT ATGCCAATGT CCGGCAGCCG CCGGTTTCCA CCCTCAATCT CGCTCACATG
ATTCCGCTCT CGGCGGTGTG GGCGGGGCCG GAACGGGACG AGCATTTTGC AGCACCGCCA
CTGCTCTTCG GCAAGACCGA AGGCTCCACC CCATTCCGGT TTTCGCTTCA CGTCGGCGAT
GTCGGACATA CGCTGATCGT CGGCCCGACC GGCGCCGGCA AGTCCGTGTT GTTGGCGCTG
ATGGCCTTGC AGTTCCGGCG CTACCGCCAA GCACAGGTCT TCGCCTTCGA TTTCGGCGGC
TCGATCCGGG CCGCGGCACT CGCCATGGGC GGCGACTGGC ACGACCTCGG TGGCGATCTG
TCCGATGGAG CGGAAGCCTC GGTCAGCCTC CAGCCACTGG CCGGCATCAA CGATGTTCCC
GAGCGCGCGT GGGCGGCCGA CTGGATCGTG GCCATCCTGA CACGCGAAGG CGTCGCCATC
ACGCCGGAGG TGAAGGAACA CATCTGGACG GCGCTGACTT CGCTGGCCTC GGCGCCGGTC
GAGGAACGCA CCATCACCGG CCTTTGCGTC CTGCTCCAGT CCAACGATCT GAAGCAGGCG
CTGCGCGCCT ATTGCATCGG CGGTCCCTAC GGACGGCTGC TCGACGCCGA GCGTGAGCAT
CTCGGCACCG CAACCGTGCA GGCGTTCGAG ACCGAAGGGC TGATCGGCAC CGGCGCCGCG
CCCGCCGTGC TCTCCTATCT GTTCCACCGC ATCGAAGACC GCCTCGACGG ATCGCCGACC
CTTCTCATCA TCGACGAGGG CTGGCTGGCG CTCGACGACG AAGGCTTCGC CAGCCAGCTC
CGCGAGTGGC TGAAGACCCT CCGCAAGAAG AACGCCAGCG TCATCTTCGC TACGCAGTCG
CTGTCCGACA TCGACGGCTC GGCGATCGCG CCTGCGATCA TCGAGAGCTG CCAGACCCGG
CTCCTGTTGC CGAACGAGCG AGCCATCGAG CCGCAGATCA CCGCGATCTA TCGCCGCTTC
GGTCTTAACG ACCGGCAGAT CGAGATCATC GCGCGGGCCA TGCCCAAGCG CGACTATTAC
TGCCAGTCCC GGCGCGGCAA CCGCCTGTTC GAGTTGGGGC TGTCGGACGT CGCCCTAGCG
CTCTGCGCCG CGTCTTCCAA AACCGACCAG ACCGCGATCG CACGGCTGTT CGCCGAACAT
GGTCAGGCGG GCTTCCTCAC CGCTTGGCTC CGCCACCGCG ATCTCGGCTG GGCGGCCGAC
CTCATCCCAA CACTCACCAC AACGGAGAAA CTGCCATGA
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| Protein sequence | MMNLAEYRNK NTRLADFLPW AALVGTGVVL NKDGSFQRTA RFRGPDLDSA VPAELVAVAG
RLNNAFRRLG SGWAIFVEAQ RHPSNRYPDS SFPDAASALV DAERKADFEE AGAHFESSYF
LTFTYLPPAE DAARAESWLY EGRDQKGLDP HEAMGGFTDR TDRLLRLVEA FMPECRWLDD
GETLTYLHGC VSTHRHRVRV PETPIYLDAL LADQPLTGGL EPRLGQSHLR VLTVTGFPTA
TTPGLLDELN RLAFPYRWST RAILLDKTDA TKLLTKIRRQ WFAKRKSVAA ILKEVMTNEA
SVLVDTDASN KAADADLALQ ELGADYAGIA YVTATVTVWD ADPRTADEKL RLVEKVIQGR
DFTVMAETIN AVDAWLGSLP GHVYANVRQP PVSTLNLAHM IPLSAVWAGP ERDEHFAAPP
LLFGKTEGST PFRFSLHVGD VGHTLIVGPT GAGKSVLLAL MALQFRRYRQ AQVFAFDFGG
SIRAAALAMG GDWHDLGGDL SDGAEASVSL QPLAGINDVP ERAWAADWIV AILTREGVAI
TPEVKEHIWT ALTSLASAPV EERTITGLCV LLQSNDLKQA LRAYCIGGPY GRLLDAEREH
LGTATVQAFE TEGLIGTGAA PAVLSYLFHR IEDRLDGSPT LLIIDEGWLA LDDEGFASQL
REWLKTLRKK NASVIFATQS LSDIDGSAIA PAIIESCQTR LLLPNERAIE PQITAIYRRF
GLNDRQIEII ARAMPKRDYY CQSRRGNRLF ELGLSDVALA LCAASSKTDQ TAIARLFAEH
GQAGFLTAWL RHRDLGWAAD LIPTLTTTEK LP
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