| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3000 |
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| Symbol | |
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| ID | 5423164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3337926 |
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| End bp | 3338684 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640882246 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001417887 |
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| Protein GI | 154246929 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGC CGCGCTCCCG CGCGGCGCGG CTCGCCGCCG CGCTGCTCGT CACCCCTGTC
GTTCTCGCCC CGATGTGGGC TGCGCCGGCG CAGGCGCAAT GGATCGTCTA TGACCCGACG
AACTATGTGC AGAACGTGCT GACGGCCGCG CGCAGCCTTC AGCAGATCAC CAATCAGATC
ACCTCGCTTC AGAACGAAGC GCAGATGCTC ATCAATCAGG CCCGTAATCT CGCCAGCCTG
CCTTATTCGT CGCTGCAACA GCTTCAGCAA TCGGTGCAGC GCACCCAACA ACTGCTCCAG
CAGGCGCAGA ACATCGCCTA CGACGTCCAG CAGATCGATC AGGCGTTCCA GACCAAATAC
GCCAATGTGT CGATGTCGGC GTCGAATACG CAACTGATCG CCGACGCCAA GGCTCGCTGG
CAGAATACAG TCGGCGGCTT GCAGGACGCC ATGCGCGTGC AGGCCACCGT CGTCGGTAAC
ATCGACACCA ACCGCACGCA GATGTCTGCA CTGGTCGGCG CCAGCCAGTC GGCAGCCGGC
GCGCTTCAAG CCACCCAGGC CGGCAATCAG CTTCTCGCCC TTCAGGCGCA GCAGCTCGCC
GATCTCACCG CCGTCGTCAC CGCCAACGGT CGGGCGCAGG CGCTGCAATC TGCGGAACAG
GCCGCAGCCG CCGAACAAGG CCGCGAGCAG CGCCGCCGCT TCCTGACGCC GGGCACCGGC
TATCAGCCCG GCAACGCGCA GATGTTCCAC GGCAATTGA
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| Protein sequence | MTLPRSRAAR LAAALLVTPV VLAPMWAAPA QAQWIVYDPT NYVQNVLTAA RSLQQITNQI
TSLQNEAQML INQARNLASL PYSSLQQLQQ SVQRTQQLLQ QAQNIAYDVQ QIDQAFQTKY
ANVSMSASNT QLIADAKARW QNTVGGLQDA MRVQATVVGN IDTNRTQMSA LVGASQSAAG
ALQATQAGNQ LLALQAQQLA DLTAVVTANG RAQALQSAEQ AAAAEQGREQ RRRFLTPGTG
YQPGNAQMFH GN
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