| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2997 |
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| Symbol | |
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| ID | 5423161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3335500 |
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| End bp | 3336183 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640882243 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001417884 |
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| Protein GI | 154246926 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC GACCGGCCAC CCATTACGGC AAATCACCCG AGCCTGAGAC GCCCTATCAG
CGCGCCGCCC AGGTCTGGGA CGAGCGTATC GGCTCCGCCC GTGTGCAGGC CCGCAACTGG
CGCTTCATGG CCTTCGGCTC GCTGGCGCTG TCGATGGGCC TTGCCGCCGC GCTGGTCTGG
CAATCCGCCA ATGGCTCGAT CGTACCCTGG GTGGTGCAGG TCGACCGGCT CGGCCAGGCG
CAGGCCGTGG CGCCGGCGAC GGCCGACTAT CAACCGAACG ACCCACAGAT CGCCTTCTAT
CTCGCGCGGT TCATCGAGCA GGTCCGCTCG ATCCCGGCCG ATGCGATCAT CGTGCGCCAG
AACTGGCTGC GCGCCTACGA CTTCACTACG CAGGGCGGTG CGCTGGCGCT CAACGACTAC
GCCCGGTCGA ACGATCCCTT CGCCAAGGTC GGCAAACAAC AGGTCGCGAT CGAGGTGTCG
TCGGTCATCC GCGCCTCGCC ATCGAGCTTC CGCATCGCCT GGATCGAGCG CCGCTATCAG
GACGGCTCTC TCGCCTCGAC CGAACGCTGG TCCGCCATCC TCACCGTCGC CGTGCAGACC
CCGCGCGACG CCGACACGCT GAAGAAGAAC CCGCTCGGAA TCTACGTCAA CGCAATCAAC
TGGTCGAAGG AGCTTGGACA ATGA
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| Protein sequence | MFKRPATHYG KSPEPETPYQ RAAQVWDERI GSARVQARNW RFMAFGSLAL SMGLAAALVW
QSANGSIVPW VVQVDRLGQA QAVAPATADY QPNDPQIAFY LARFIEQVRS IPADAIIVRQ
NWLRAYDFTT QGGALALNDY ARSNDPFAKV GKQQVAIEVS SVIRASPSSF RIAWIERRYQ
DGSLASTERW SAILTVAVQT PRDADTLKKN PLGIYVNAIN WSKELGQ
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