Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2996 |
Symbol | |
ID | 5423732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 3334460 |
End bp | 3335503 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640882242 |
Product | P-type conjugative transfer protein TrbG |
Protein accession | YP_001417883 |
Protein GI | 154246925 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.646322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCAG CACTCCACAA AGCCGCCCCC TGGAGTGCAG GGCGTCCGGC TTTCCGTAAA TCCGGCTTGC CGCTTCTGCT GCTCTGCACG TCTGCGCTCT CCGGTTGCGC CACCAACACA CCGCCCCCGG AAATCGCCTA TGACAACGCC ATCCCCGCCG TACAGGCGAC CGAGCCGCCC AGGCCCGTAC AGGTGGTGGA GCTGCCCAGG CCCTTGCCAC TTCCCGGCCA GTTGAAACCG GTCGGTAAGG ACGGCAAGCC CGTCCCCGAA GCTGCCGATC CGACCGTGCG CGTCAACCAG GCCAACGCCG CCGCGCGTGT TCAGCCCGTC CGCGATGGCT TCATCAACTC GATGCAGGTC TATCCCTTCG TCGATGGCGC GCTTTATCAG GTCTATGCCT CACCGGGGCA GATCACCGAC ATCGCGCTCC AGCCCGGCGA GCAGTTCGTC GGCGTCGGCC CCGTCGCCGC CGGCGATACG GTGCGCTGGA TCATCGGAGA TACCGAGAGT GGCACGGGGG CGGGCAAACA AATCCACATC CTCGTCAAGC CGACGCGGCC CGATCTGCTG ACCAATCTCA TCATCAACAC CGACCGTCGC ACCTACCACA TGGAACTGCG CTCGACGCCT TCGACCTATA TGGCCTCGGT TTCCTGGCAA TATCCGCAGG ACCAGCTCAT CGCGCTCCGG CGGCAGAATG CCGACGCGCA GGCCGCGCAG CCGGTTTCCA ACGGCATCGA CCTGTCGCGC GTCAACTTCC GCTATGAGGT GTCAGGCGAC CGTGCGCCTT GGCGGCCGCT GCGCGCTTTC GACGATGGCA AGCAGGTCTT TATCGAGTTC CCGCGCGGCA TCGGCCAGGG CGAGATGCCA CCACTGTTCG TGGTCGGGCC GGAGGGCAAC ACGTCCGAGC TGGTGAACTA CCGCGTGCGC GGCAACTACA TGATCGTGGA CCGACTGTTC GCCGCCGCCG AGCTGCGCTT CGGCGCAGGT AAGAACCAGA AGCGCGTGCG TATCTCCCGC ACCGATGGGA GGCCGGCATC GTGA
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Protein sequence | MTPALHKAAP WSAGRPAFRK SGLPLLLLCT SALSGCATNT PPPEIAYDNA IPAVQATEPP RPVQVVELPR PLPLPGQLKP VGKDGKPVPE AADPTVRVNQ ANAAARVQPV RDGFINSMQV YPFVDGALYQ VYASPGQITD IALQPGEQFV GVGPVAAGDT VRWIIGDTES GTGAGKQIHI LVKPTRPDLL TNLIINTDRR TYHMELRSTP STYMASVSWQ YPQDQLIALR RQNADAQAAQ PVSNGIDLSR VNFRYEVSGD RAPWRPLRAF DDGKQVFIEF PRGIGQGEMP PLFVVGPEGN TSELVNYRVR GNYMIVDRLF AAAELRFGAG KNQKRVRISR TDGRPAS
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