Gene Xaut_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2996 
Symbol 
ID5423732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3334460 
End bp3335503 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content66% 
IMG OID640882242 
ProductP-type conjugative transfer protein TrbG 
Protein accessionYP_001417883 
Protein GI154246925 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02775] P-type conjugative transfer protein TrbG 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.646322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG CACTCCACAA AGCCGCCCCC TGGAGTGCAG GGCGTCCGGC TTTCCGTAAA 
TCCGGCTTGC CGCTTCTGCT GCTCTGCACG TCTGCGCTCT CCGGTTGCGC CACCAACACA
CCGCCCCCGG AAATCGCCTA TGACAACGCC ATCCCCGCCG TACAGGCGAC CGAGCCGCCC
AGGCCCGTAC AGGTGGTGGA GCTGCCCAGG CCCTTGCCAC TTCCCGGCCA GTTGAAACCG
GTCGGTAAGG ACGGCAAGCC CGTCCCCGAA GCTGCCGATC CGACCGTGCG CGTCAACCAG
GCCAACGCCG CCGCGCGTGT TCAGCCCGTC CGCGATGGCT TCATCAACTC GATGCAGGTC
TATCCCTTCG TCGATGGCGC GCTTTATCAG GTCTATGCCT CACCGGGGCA GATCACCGAC
ATCGCGCTCC AGCCCGGCGA GCAGTTCGTC GGCGTCGGCC CCGTCGCCGC CGGCGATACG
GTGCGCTGGA TCATCGGAGA TACCGAGAGT GGCACGGGGG CGGGCAAACA AATCCACATC
CTCGTCAAGC CGACGCGGCC CGATCTGCTG ACCAATCTCA TCATCAACAC CGACCGTCGC
ACCTACCACA TGGAACTGCG CTCGACGCCT TCGACCTATA TGGCCTCGGT TTCCTGGCAA
TATCCGCAGG ACCAGCTCAT CGCGCTCCGG CGGCAGAATG CCGACGCGCA GGCCGCGCAG
CCGGTTTCCA ACGGCATCGA CCTGTCGCGC GTCAACTTCC GCTATGAGGT GTCAGGCGAC
CGTGCGCCTT GGCGGCCGCT GCGCGCTTTC GACGATGGCA AGCAGGTCTT TATCGAGTTC
CCGCGCGGCA TCGGCCAGGG CGAGATGCCA CCACTGTTCG TGGTCGGGCC GGAGGGCAAC
ACGTCCGAGC TGGTGAACTA CCGCGTGCGC GGCAACTACA TGATCGTGGA CCGACTGTTC
GCCGCCGCCG AGCTGCGCTT CGGCGCAGGT AAGAACCAGA AGCGCGTGCG TATCTCCCGC
ACCGATGGGA GGCCGGCATC GTGA
 
Protein sequence
MTPALHKAAP WSAGRPAFRK SGLPLLLLCT SALSGCATNT PPPEIAYDNA IPAVQATEPP 
RPVQVVELPR PLPLPGQLKP VGKDGKPVPE AADPTVRVNQ ANAAARVQPV RDGFINSMQV
YPFVDGALYQ VYASPGQITD IALQPGEQFV GVGPVAAGDT VRWIIGDTES GTGAGKQIHI
LVKPTRPDLL TNLIINTDRR TYHMELRSTP STYMASVSWQ YPQDQLIALR RQNADAQAAQ
PVSNGIDLSR VNFRYEVSGD RAPWRPLRAF DDGKQVFIEF PRGIGQGEMP PLFVVGPEGN
TSELVNYRVR GNYMIVDRLF AAAELRFGAG KNQKRVRISR TDGRPAS