| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2990 |
|---|
| Symbol | |
|---|
| ID | 5423619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3321642 |
|---|
| End bp | 3325862 |
|---|
| Gene Length | 4221 bp |
|---|
| Protein Length | 1406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640882237 |
|---|
| Product | putative ATPase |
|---|
| Protein accession | YP_001417878 |
|---|
| Protein GI | 154246920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.12243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG GCCGCCAGAT CGAAACCATC CTCGCCGACC CTCCTGGCTA TTTTCGGTCG
ATTCAGGAGC GCGCCACCAA GCGCTGGGAT CAGCTCGATG CCGACCCGGA ACTTGCCGGA
CCTTGGCACC AGCTCTTCAA GCAGGTGCAG AGCCCGCGCC ATATTCTGTC CGAGCTACTC
CAGAACGCTG ACGACGCCGG GGCCAGCGAA GCGCGGGTGT CGATCGAGAA CGATCGCTTT
GTGTTCGAGC ACAATGGCGA GGACTTCATC GAGGCTCACT TCGCCTCGAT CTGCCGGTTC
GGTTATTCCA ACAAGCGCGC GCTGCACACG ATCGGTTTCC GTGGGATCGG GTTCAAAAGC
ACGTTCAGCT TGGGCGATCG GGTCGAGCTT TTCACGCCGA CCCTAGCAGT CGCCTTCGAG
CGCACGCGGT TCACCCAGCC GCATTGGGTC GATAGCCGTC GCCTGACATC GGGAACTACG
CGCGTTGAAG TGGCGATCGC CAACCCGCTG CTGTGCCGCG AGGTGGAGAA GAATCTCGAC
GAGTGGCTGA AGAGTCCGGT GTCGCTGCTG TTTTTCAAGA AGATTCGCCG CCTGCGGATC
GGCGACAGCG AGGTGCATTG GCAGAGTCTC GGGCCTGGCC CCGTCGCCGA GAGCGAATGG
ATGGCTTTGG ATGAGAAAGC GGACGATCCC TTTCTCCTCG TGCGGTCAGG GGAGGAAGCC
TTCCCGGCCG AAGCGCTCGA TGAGATCCGC AAGGAGCGGA TGCTGGGGGC CGAGGATGGC
GGCGATTTTC CGCCCTGCCG CGTGGAAATC GTGCTGGGCG CGAAGGGCCG GCTCTATGTC
GTGCTGCCGA CCGGCGTGGA AACGACGCTA CCTTTCGCCT GCAACGCGCC CTTCATCCAG
GACCCCGCTC GTCTCAAGAT CAAGGACCCG GAAACCTCGC CGACCAACCG CTGGCTCCTG
AACCGCGCTG GAGAATTGGC CGCCAGCGCC ATGATGGAGT GGCTGGAGCA GACCAAGACC
AGCGCGCGGG ATCGGGCAGA CGCCTATGGC TTGCTGCCTG ACGTCGACCG TGAGGCGGCC
ACGCTCGAAG GGGCGTGCGG CGCGATTGTC GAGCTGGCGT TTGACGCGGC CATCGAAGGC
CGACCGATGC TTCTGACTGA AGAGGGACGA CTGGTCGACG CCAAGGCCGC GATCACCGTG
CCGCGGCCTG TCTTCGACAT CTGGCCGGCG GACCAGGCCA TGGCGCTGCT CGACGTCAAA
TCCCGGCCGG CGCTGTGCCA GCATGTATCG GCCAAGAACC GGACCAAGCT CGTTCACTGG
GGTCTGGTCG AGGAGTTCTC GAAGTCCGAT CTGCTCGAGC GCCTGCGCAG CCATCATCTG
CCGCGGCCTG CGACCTGGCG GCACCTGTTG AATCTGTGGG CCTATATCGC GCCCGAGGTG
ACGGGTTGGC AGTGCCACGA CACCGACGGC CTGCGGATCG TGCCTGTGCA GGGCAAGGAG
GTGCTCTACG CGGCGTCGGA GATCGTTCGG CTCGGCGAGA AGAAGCTGCT TCAGTCGGAA
GAGGATTGGG AGTTTCTCGC CAGCCATTTG ATCGTCCTCA ACCAGAACTG GACCCGGTTC
CTCGCCGAGC AGCGCCGTGA CAAGGCGGAG GGAGAGAACC GCAAAGACCC GGTTGAGGCG
GCCTTCGCGG TGCTGGAGGA GATCGGCCTC GACGGGACGA GCGACGTCAA CGCGGTGATC
GAGCGGGTCG CCGCCGACTA TTTCGCGGCT GGCCAACCGA AGCTCGCCGA GTGTGTCCAG
CTCGCCCAGA TCGCGGCCAA GCTGGGCGTC ACCATTGGCG ACGCCTTCCG ATATGCCTGC
GCCGACTTGA AACTTCGGCC GATCGGCAAG GGGGTGTTGT TCGACGAGAA TGGCGCGCTC
GAGGAGTTGC TGCCGGAGTC CGTCCGAAAG ACGCAGCTCC TGCACGGTGA TTATGTAGCG
AGCTTCAAAT CCTGCACGCG GGAGGATTGG CTGCGCTGGG TATCGTCGGG CCGTTCGGGG
CTTCAGACGA TGGCGCCGCT CGCGCAGAAG CGGACCAGCC TTTACGGACG TCAGCGCGCG
GTGACGGAGG CGCAGGCGCG CGGCCAGCGT CAGGGGCTTT ACTACGCCTA TGTCACGGAG
AGCTTCGTTC TCGATGACTG GGACTTCTCG GCCGATTACT GGCGGCATTG GGAGGCGTTG
TCGAAGGCCG ATCCCGGCAT CTGGGCCAAG GTGGTTGGAA AGATTCTGGA ACAGCGTGAC
ATCTATTGGT CGCGGGCGTC GAGCGCTCGC CTGTTGCAGG TGGCGACAAC CGGATCGACG
CGAGCAGTCA GCTCGGAACC GTTGCTGGCG GACTGGTTGC TGAAGTTGCG GGCCAAGCCC
TGCCTTCCCG ACACCCGCAA CATCATCCAG CTCCCGGCCG ACGTGGTGCG CAGGACACCG
GAGACGGAGG CGCTGATCGA CGTCGAGCCC TTCGTGCATG GCTTGCTCGA TCGGGAAACG
ACGCGCCCGC TGCTCGATCT TCTCGGTGTC CGCAGCACGC CGAGCGGTCC CGGACGCCTG
CTCGACCGGC TGCGCGCCTT GGCGAAATCC GACAAGGCTC CGGCGCATGA GGTGGAGAAA
TGGTATCGTC GCCTGGATCA GATGCTCGAC GGGTGCTCGA CCGCTGACGC GCAAAACATC
AAGAACGCCT TCAAAACCGA GAAGCTGGTC CTCGCCCAGG ACGGGACTTG GGTGACGTCG
GCCGGCGTTT TCCTGGCCGG GGACGAGGAG GATGTTCCCG GCGCGGCGGT CGTCCGCGCC
TCCGTGCTCG ACCTCAGCCT ATGGCATCGT ATCGGTGTCG CCGATCGCCC GTCCGCGGAC
CTGGCGCTGC AATGGCTTGG GACGCTGGCC TCGGGGAAAG CGCTCTCGGC CGACGACGCC
CGGCGTGTTC GCACCTTGCT GGTCCGATAC CCGATCCGCA TCTGGGAGGA GCGCGGGCAC
TGGCTGAACC TCGTGGGGGA GTGGGCGCCG GTCGAAACGC TTGCCTATGG CCTCAGCATG
CAGACCCTGT TCCGGTGGAG CCATCTGCAC GAATGGGTCA AGCGCAAGAC CGCCGATTTT
CAGCGGTTGT CGGGGGAGAC GGTGCAGGCG CCGCCATTCT CGGCATTGCC GGCTTTGTCG
GACCTCGTGG AGGAGCATTT CAACCAGCCG TCGCTGCTGG CCGGCATCGA AGATCGCCGC
GCCTGGCTGA CGGCGTTCGG AACCCAACTC GGGCGGATCG AGCTTGCCGA TTCCACCGAG
ACCGAGCGCG TGCGGGCGCT GGCAGAAGCG ATCGCGGCGA CGAGCTGGGT CCAGACCCCC
AAGCTGGAGG TCATTCCCTA TCTCGACGGC GTGCCCGCCG GAACGGCGCG GCTCACCGAC
ATCCTGTGGC TCGACGGCAA GCTGTTCGTT AGCCCGCTAT CCAAGGCCAA GCTCGCGAAG
CGGGTCCCGG AAGAGATCGG CAGGAATCTG AGCGCGGACA TTCGCGCGGC GCTGGCCTAT
GCGTTCGAGC GCTCGTCCGA GGACATCAAG GAGTATCTCG AAGAGAATTT CACCCTCGGT
CCTGAGCAGA TCGTCGTCGC ACCGATGGCC CAGCACGTCG TCGAAGCCGA CGATGATGAT
GGTGTCGACG TGGTTGCCGA AGACGCGCAC AGCGATGGTG AGCCGGTCGC TGCGAAAGAT
CTCCACCCCG ACGAGGATGA GCCCGAAACG CAGCCTACAG CCGCGCCCTC GGCCGGGGAG
CCAGATCGAG AGCTGATCGA AACGGAGGTG GCGACCAGGC CCCGGGCCGC GCCGAAACCG
CCCCGTCCGA GCGTGATGGC GCGGTTTGCA TTCGCCCAAG GCTATAAGGC CGATGGCGAA
GATCGCTTTT TCCATGTGGA CGGAAGCTGG ATCGGTCGTG GCAACGGCGC GCGCTTTCCA
TGGGAGCGCC GCTCGGCCAG CGGCGAGATT CTGCGGCACT ACTATCCCAA AGACCATTGC
CTGGAGCACG AACCGCTCCA GCTCGAAGCT GACGTCTGGG GCCTGCTGGA CCAGAAGCCG
GATCTCTATT CGTTCATTCT CATCAACCCG GAAGGTGGTC CCGTCGAAAT GACGGGCGCC
CGCCTGCGCG CTCTACGCGA CGGCGGCGAA CTGACCATCC ATCCCGCAAC GTACAGGCTT
GTTTATGACC TCGACGACTA A
|
|---|
| Protein sequence | MSAGRQIETI LADPPGYFRS IQERATKRWD QLDADPELAG PWHQLFKQVQ SPRHILSELL
QNADDAGASE ARVSIENDRF VFEHNGEDFI EAHFASICRF GYSNKRALHT IGFRGIGFKS
TFSLGDRVEL FTPTLAVAFE RTRFTQPHWV DSRRLTSGTT RVEVAIANPL LCREVEKNLD
EWLKSPVSLL FFKKIRRLRI GDSEVHWQSL GPGPVAESEW MALDEKADDP FLLVRSGEEA
FPAEALDEIR KERMLGAEDG GDFPPCRVEI VLGAKGRLYV VLPTGVETTL PFACNAPFIQ
DPARLKIKDP ETSPTNRWLL NRAGELAASA MMEWLEQTKT SARDRADAYG LLPDVDREAA
TLEGACGAIV ELAFDAAIEG RPMLLTEEGR LVDAKAAITV PRPVFDIWPA DQAMALLDVK
SRPALCQHVS AKNRTKLVHW GLVEEFSKSD LLERLRSHHL PRPATWRHLL NLWAYIAPEV
TGWQCHDTDG LRIVPVQGKE VLYAASEIVR LGEKKLLQSE EDWEFLASHL IVLNQNWTRF
LAEQRRDKAE GENRKDPVEA AFAVLEEIGL DGTSDVNAVI ERVAADYFAA GQPKLAECVQ
LAQIAAKLGV TIGDAFRYAC ADLKLRPIGK GVLFDENGAL EELLPESVRK TQLLHGDYVA
SFKSCTREDW LRWVSSGRSG LQTMAPLAQK RTSLYGRQRA VTEAQARGQR QGLYYAYVTE
SFVLDDWDFS ADYWRHWEAL SKADPGIWAK VVGKILEQRD IYWSRASSAR LLQVATTGST
RAVSSEPLLA DWLLKLRAKP CLPDTRNIIQ LPADVVRRTP ETEALIDVEP FVHGLLDRET
TRPLLDLLGV RSTPSGPGRL LDRLRALAKS DKAPAHEVEK WYRRLDQMLD GCSTADAQNI
KNAFKTEKLV LAQDGTWVTS AGVFLAGDEE DVPGAAVVRA SVLDLSLWHR IGVADRPSAD
LALQWLGTLA SGKALSADDA RRVRTLLVRY PIRIWEERGH WLNLVGEWAP VETLAYGLSM
QTLFRWSHLH EWVKRKTADF QRLSGETVQA PPFSALPALS DLVEEHFNQP SLLAGIEDRR
AWLTAFGTQL GRIELADSTE TERVRALAEA IAATSWVQTP KLEVIPYLDG VPAGTARLTD
ILWLDGKLFV SPLSKAKLAK RVPEEIGRNL SADIRAALAY AFERSSEDIK EYLEENFTLG
PEQIVVAPMA QHVVEADDDD GVDVVAEDAH SDGEPVAAKD LHPDEDEPET QPTAAPSAGE
PDRELIETEV ATRPRAAPKP PRPSVMARFA FAQGYKADGE DRFFHVDGSW IGRGNGARFP
WERRSASGEI LRHYYPKDHC LEHEPLQLEA DVWGLLDQKP DLYSFILINP EGGPVEMTGA
RLRALRDGGE LTIHPATYRL VYDLDD
|
|---|
| |