| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2988 |
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| Symbol | |
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| ID | 5423633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3317642 |
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| End bp | 3321145 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640882235 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001417876 |
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| Protein GI | 154246918 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.249556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0303963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCAA GGCTTGAAGA GATAAAGAAC GGCGCATCCG TGCGAGGCGT TGCCTCGGCA
CAGGCCGTGC ATGTCATTTC GGTCGATTGG ATCGGCGATC AGGCGGTCAG CGTCGTCTTC
CGCGATCACA ACGGCGCGGT GGCGGAGGCG GTTCTTTATC GCGACGACGA GCACCGTCTG
GAGATCGAAC AGAACGGCCG GCCCTGGTCG TTCGACGCGG ACGGTGCGTT GCTGCGTCTG
GTGACGGAAG CCAACCGCAT CAAGTTGGCG CACTATTTCG ATCCGTATCT CGCCATCCAC
ACCAGCCTGG TCGACCCGCT GCCGCACCAG ATCTCTGCCG TTTATGGCGA GATGCTGCCG
CGGCAGCCGC TTCGCTTCCT CCTTGCCGAC GATCCCGGCG CCGGCAAGAC GATTATGGCC
GGGCTATTGA TGAAGGAACT GATCGCCCGT AGCGATCTGG AGCGATGCCT CGTTGTCGCG
CCGGGCGGCC TGGTCGAGCA GTGGCAGGAC GAACTCGGCC AGAAGTTCAA TCTTGAATTC
GATATCCTCT CCCGCGACAT GATCGAGAAC TCGCGGTCGG GCAATCCGTT CAGCGACCGG
GATCGGCTGA TCGTCCGTCT CGACGTGCTG GCGCGCAACG AGGAGCTTCA GGAGAAGCTC
ATGAGCGCGC GCGAATGGGA CCTGATCATC TGCGACGAGG CGCATCGCAT GTCGGCCACC
TATTTTGGTG GCGAGGTCAA ATATACGCGC CGCTATCAGG TCGGTCAGAA GCTCGGCCAA
GTCTGCCGGC ATCTGCTGCT GATGTCGGCG ACGCCGCACA ATGGCAAGGA AGAGGATTTC
CAGCTTTTCA TGGCGTTGCT CGACGGTGAT CGGTTTGAGG GCCGGTTCCG GGATGGCGTC
CACTATGCCG ATACCGAAGA CATGATGAGG CGGCTGACCA AGGAGGAACT GCTGAAGTTC
GATGGCCGGC CGCTCTTCCC GGAACGGCGG GCGCGCACCG TCAAATATCA GCTCTCGGAA
GGGGAGGCCG CGCTCTACAC CGCCGTCACC GAATATGTGC GCACTGAGAT GAACCGCGTG
CAGCGGTTCG CCGAAGGCGA TGGGAAGAAG CGCAATAATG TCGGCTTCGC CTTGCAGATT
CTCCAGCGGC GTCTCGCATC GTCGCCGGCC GCCATTTACC AGTCCCTCAA GCGACGGCGC
GAACGGCTGG AAAACGAGCT GGGTGAGGCG CGCCTTGCCG CCAAGGGCCG CCGGGCGGGC
ATGGGTGAGC CGGCGATCAA CGCCGATATG CTGCGCAATA TCGAGGAATA TGGCCAGGAG
GAGATCGACG AGCTTGAGGA TCTGATCTCG ACGGGCGCGA CGACGGCCGA GACGGTTGAG
CAGCTCGCGT TGGAAGTTGA GACGCTGAAG GGCCTGGAGA CGATGGCGCT CGGCGTGCTG
CGCTCCGGCG TGGATACGAA GTGGAGCCAG CTCAATCGTA TCCTCGACGA CGATCTCATG
ATTGATTCCG CCGGCAATCG CCGCAAGCTG ATCATCTTCA CCGAACCCAA GGACACGTTG
CACTACCTGC TCGACAAGGT GCGGGCGCGG CTTGGAAATC CCGAGGCCGT GGAAGTGATC
CACGGCGGGG TGTCGCGCGA AGAGCGACGC AAGGTCGTCG AGCGCTTCAT GCAGGATAAG
GACATGCTGG TCCTCATCGC CAACGACGCG GCGGGCGAGG GCGTGAACCT TCAGCGCGGC
CACCTCATGG TCAATTACGA CTTGCCGTGG AATCCCAACA AGATCGAGCA GCGGTTCGGC
CGTATCCACC GCATCGGCCA GACCGAGGTT TGTCATCTTT GGAATCTGGT CGCGGCCGAC
ACGCGCGAGG GTGAGGTTTA TGCCCGTCTG CTTGAGAAGC TGGAGGCAGC ACGCGAGGCG
CTGGGCGGCC GTGTCTATGA CGTGCTCGGC GAATTGTTCG ACGGCGTGGC GCTCAAGGAT
CTGCTGTTTG AGGCGATCCA GTATGGCGAG AAGGAAGAGG TAAAGGCGCG TCTGTTCCAG
CAAGTCGATG GCGCGGTCGA TCAGGCACAT CTGCTCGAAT TGTTGCGTCG CCGCGCTCTG
ACCAACGACA CCATGCCGGA GGGCAGGGTC GAGGAGTTGC GGCTTGAAAT GGAACGCGCC
GACGCACTGC GTCTCCAGCC GCACCACGTC CAGAGCTTCT TCGTCGAGGC GTTCCAGCAT
CTGGGCGGTC GCATCAAGCG CCGCGAGGAG GGGCGCTGGG AGATCGCCCA TGTGCCTGTG
CGCATCCGCG AGCGGGATCG TCAGATCGGG ACCGGCGCGC CGATCCAGAC GCAATATGAG
CGGATCTGCT TCGAGAAGGA CAAGATCAAC CAGCAGCCGG TCGCTGCCTT CGTCTGTCCC
GGCCATCCGC TGCTGGAAGC GGTGATCAGC CTGATCCGTG AACAGTATGA GCAGATCATG
CGGCAGGGCG CGATCCTGGT GGACGACACC GATACCGGCG ACGCGCTGTC GGCGATTTTC
CTGCTGGAGC ATACGGTCCA GGACGGTCGA GTCACCAGCG CCGGCAAGCC GCATGTGATT
TCGCAGCGGC TCCAGTTTGC TGCCATCGAC AAGGCCGGAA ACACCGTCAA CGCCGGCATC
GCACCGCATT TGAATCTGCG CCCCGCCAGG CCGGAAGAGG TCGCCAGCGT TCGCGATCTT
CTGGACGAGA GCTGGCTGAC TACCGATCTG GAGAGGGCCG CAATCCGGTT TGCGACGGTC
GAGCTGGCGC AGGGCCATGT CGCCGAGGTC AAGGCGCGGC GCCTACCCGA GATCGAAAAG
GTTGAGCAGG AGGTTCGCGC CCGGCTCAAG AAGGAGATCA ATTATTGGGA CTCGCGTGCC
TTCGAGCTGA AGGAGGAGGA GCGCGCTGGC AAGAAGACGC GGGTGAATTG GCAGAACGCG
CAACGACGGG CTGAAGATCT GGCAGATCGG CAGAAGCGCC GCATGGATCA GCTTGAGCGG
GAGCGGTTCA TCTCATCGCA GCCGCCGCGC GTGCGGGGTG GCATGGTGGT CATTCCGCGG
GGCTTGTTGG AAGCACGCCA GTCGCCAAGC GTCCCGGACC ATTTCGCAGA AGACCCGGCC
GCTCGCCGGG TTATCGAGCT TGCGGCGATG GAGGCGGTCA TGGCGGCCGA GCGGGCGCTG
GGCAACGAGC CGGCCGACGT CTCCGCCCAG AAGATCGGCT ACGACATAGC TTCCCACGAT
CCGAGGGCGG GGCATCTGCG TTTCATCGAG GTCAAGGGAC GCATCGATGG CGCCGACAGC
GTGATGGTCA CGCGGCAGGA GGTCATCACC TCGCTGCACG AGCCGGAGAA GTTCATTCTC
GCCATCGTGC CGGTCGCCGC CGGCTTCGCC CATGCACCGC GTTATGTGCG CGGCCCGCTC
GTCGAACGGG AGCCGTCGTT CCTCGAAACT GCAATCCAGT TTGACCTCCG GCGCCTGCTG
GAGCGGGCGC AAGAGCCGGC ATAG
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| Protein sequence | MGARLEEIKN GASVRGVASA QAVHVISVDW IGDQAVSVVF RDHNGAVAEA VLYRDDEHRL
EIEQNGRPWS FDADGALLRL VTEANRIKLA HYFDPYLAIH TSLVDPLPHQ ISAVYGEMLP
RQPLRFLLAD DPGAGKTIMA GLLMKELIAR SDLERCLVVA PGGLVEQWQD ELGQKFNLEF
DILSRDMIEN SRSGNPFSDR DRLIVRLDVL ARNEELQEKL MSAREWDLII CDEAHRMSAT
YFGGEVKYTR RYQVGQKLGQ VCRHLLLMSA TPHNGKEEDF QLFMALLDGD RFEGRFRDGV
HYADTEDMMR RLTKEELLKF DGRPLFPERR ARTVKYQLSE GEAALYTAVT EYVRTEMNRV
QRFAEGDGKK RNNVGFALQI LQRRLASSPA AIYQSLKRRR ERLENELGEA RLAAKGRRAG
MGEPAINADM LRNIEEYGQE EIDELEDLIS TGATTAETVE QLALEVETLK GLETMALGVL
RSGVDTKWSQ LNRILDDDLM IDSAGNRRKL IIFTEPKDTL HYLLDKVRAR LGNPEAVEVI
HGGVSREERR KVVERFMQDK DMLVLIANDA AGEGVNLQRG HLMVNYDLPW NPNKIEQRFG
RIHRIGQTEV CHLWNLVAAD TREGEVYARL LEKLEAAREA LGGRVYDVLG ELFDGVALKD
LLFEAIQYGE KEEVKARLFQ QVDGAVDQAH LLELLRRRAL TNDTMPEGRV EELRLEMERA
DALRLQPHHV QSFFVEAFQH LGGRIKRREE GRWEIAHVPV RIRERDRQIG TGAPIQTQYE
RICFEKDKIN QQPVAAFVCP GHPLLEAVIS LIREQYEQIM RQGAILVDDT DTGDALSAIF
LLEHTVQDGR VTSAGKPHVI SQRLQFAAID KAGNTVNAGI APHLNLRPAR PEEVASVRDL
LDESWLTTDL ERAAIRFATV ELAQGHVAEV KARRLPEIEK VEQEVRARLK KEINYWDSRA
FELKEEERAG KKTRVNWQNA QRRAEDLADR QKRRMDQLER ERFISSQPPR VRGGMVVIPR
GLLEARQSPS VPDHFAEDPA ARRVIELAAM EAVMAAERAL GNEPADVSAQ KIGYDIASHD
PRAGHLRFIE VKGRIDGADS VMVTRQEVIT SLHEPEKFIL AIVPVAAGFA HAPRYVRGPL
VEREPSFLET AIQFDLRRLL ERAQEPA
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