Gene Xaut_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2950 
Symbol 
ID5422983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3277509 
End bp3278189 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID640882202 
ProductNUDIX hydrolase 
Protein accessionYP_001417843 
Protein GI154246885 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.972193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.639343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC ACACCGACGC GGAGGCGCCC GTCGCGACTG GAACAGCCGA CGGCCTTTCT 
GATTTTCTCG CCCGCGCGGC GGCGCGCCTG TCTTCCGAGC CGCCGCCCTT ATATTCGCAG
GCGGCCTTCC TCGGGCTCAA TGGCGATCAT GCCCTTCAGC CGGAGAAGGC GAGCCTCGCG
CCGGCGGCGA CGCCACGCCA TGCGGCGGTG CTGGTTCCCG TGGTGGCCCG GCCGGAGCCT
ACCATCCTGC TCACCCTGCG GTCGTCGAGC CTTTCCAACC ATGCCGGGCA GATCGCCTTT
CCCGGCGGGC GGGTGGACCC CGGCGACCGG GACGAGCTCG ATGCCGCCCT GCGGGAGGCG
CGAGAGGAAG TGGGGCTCGA TTCGCGGCTG GTACGGCCGC TCGGCTATCT GGACGGCTAT
CTCTCCGGCA CCGGATTCTG GATTGCGCCG GCAGTGGGGC TGGTCGATCC GGCCTACACG
CTGACCCTTA ATCCGGCGGA GGTGGATGAG GCGTTCGAGG TACCGCTCAG CTTCCTCATG
AGCCCGCGCA ATCATGAGCG CCAGTCGCGC GACTGGAAGG GCACGCTGCG CCATTTCTAC
GTTATGCCTT ATGAAGGGCG GAACATCTGG GGGGCGACCG CAGGCATGCT GCGCAACCTC
TACGAAAAGG TCTACGCCTG A
 
Protein sequence
MTHHTDAEAP VATGTADGLS DFLARAAARL SSEPPPLYSQ AAFLGLNGDH ALQPEKASLA 
PAATPRHAAV LVPVVARPEP TILLTLRSSS LSNHAGQIAF PGGRVDPGDR DELDAALREA
REEVGLDSRL VRPLGYLDGY LSGTGFWIAP AVGLVDPAYT LTLNPAEVDE AFEVPLSFLM
SPRNHERQSR DWKGTLRHFY VMPYEGRNIW GATAGMLRNL YEKVYA