| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2886 |
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| Symbol | |
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| ID | 5421612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3211067 |
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| End bp | 3212092 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640882140 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_001417782 |
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| Protein GI | 154246824 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.361608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.174381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGT CTTTCCGTAA AGCCGGAAAC CCGGCTTCTC GCACTTCCAC ATTTGCGATT
CTGCTGCTGT GCACGTCGGC CCTCGCCGGC TGCGCCACGG CGAACAGGCC GCCGGAGATC
TCCTACGATG ACGCAGTGCC GGCGGCGCTG AGCGCCAATC CCCCGGCTCC CGTGCGCGTG
GTCGAGCTGC CGAGACCTCT GCCGCTCCCT GGTCAGATGA AGCCCGTCGA GCCATCCCGC
GGCACACCCG AACCCACCGA TCCGACAGCG CGCGTCAATC AGGCCAACGC CGCCGCGCGC
GTGCAGCCGG TCCGCGACGG CTTCATCAAC GCCATGCAGG TCTATCCCTA TACGGGCGGC
GCGCTCTATC AGGTCTATAC CGCCGTCGGC CAGATCACCG ACATAGCCCT TCAGCCGGGC
GAGCAACTGG TCGGCTCCGG TCCAGTCGCC GCCGGCGACA CGGTTCGCTG GATCATCGGC
GATACGCTGA GCGGCGCGGG CGCGACGAGC CAAGTCCACA TCCTGGTGAA GCCCACCCGC
GCCGACCTGA TGACGAATCT CATCATCAAC ACGAACTTGC GCACCTACCA CATGGAACTT
CGCTCGACCG AGCGCACCTA TATGGCTTCG GTGTCCTGGC AGTATCCGCA GGATCAGCTC
ATCGCGCTGC GGCGCCAGAA CGCGCAGGCA GAGGCCGCTA GGCCAGTCGC CACCGGCGTC
GACCTCGCCA ACATCAATTT CCGCTATGCG ATCGAAGGCG ACCGCGCACC TTGGCGACCG
CTGCGCGCCT ACGATGATGG TCGCCAGGTC TTCATCGAGT TTCCCCGCGG CATCGGCCAG
GGCGAAATGC CGCCGCTGTT CGTAGTGGGT CCGGAAGGCA ACACCTCCGA ACTCGTGAAC
TACCGCGTTC GCGCAAACTA CATGATCGTC GACCGCCTGT TCGCGGCCGC CGAGCTGCGC
TTCGGCGCAG GCGACCGCCA GAAACGCGTC CGGATCGTCC GCACCGATGG GAGGCCCGCG
TCGTGA
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| Protein sequence | MKPSFRKAGN PASRTSTFAI LLLCTSALAG CATANRPPEI SYDDAVPAAL SANPPAPVRV
VELPRPLPLP GQMKPVEPSR GTPEPTDPTA RVNQANAAAR VQPVRDGFIN AMQVYPYTGG
ALYQVYTAVG QITDIALQPG EQLVGSGPVA AGDTVRWIIG DTLSGAGATS QVHILVKPTR
ADLMTNLIIN TNLRTYHMEL RSTERTYMAS VSWQYPQDQL IALRRQNAQA EAARPVATGV
DLANINFRYA IEGDRAPWRP LRAYDDGRQV FIEFPRGIGQ GEMPPLFVVG PEGNTSELVN
YRVRANYMIV DRLFAAAELR FGAGDRQKRV RIVRTDGRPA S
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