Gene Xaut_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2882 
Symbol 
ID5422330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3207957 
End bp3208718 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID640882136 
Productconjugal transfer protein TrbJ 
Protein accessionYP_001417778 
Protein GI154246820 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5314] Conjugal transfer/entry exclusion protein 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0488522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0400319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCC GTCGCTCACG CGCGGCGCTT CTTGCCGCAT CGATCCTTTC CGTCCCCGTG 
GCGATGTCGC CCGTGATGAT CCAGCCGGCG TCCGCGCAAT GGATCGTCTA CGACCCGACG
AACTACGTGC AGAATGTTCT CTCCGCAGCT CGTGCCCTGG AGCAGATCAA CAACCAGATC
ACCTCGCTTC AGAATGAAGC GACGATGCTG ATCAACCAGG CGCGAAACCT CGCGAGCCTG
CCTTACTCCT CGCTTCAGCG CCTGCAGCAG TCCGTGCAGC GGACGCAGCA ACTCCTCGGC
CAGGCGCAGC GCATCGCCTA CGACGTCCAG CAGATCGACC AGGCCTTCAC CTCCACCTAC
GGCAATGCGT CGATGTCGGC GTCCGACCAG CAACTCGTAG CGCAAGCGCG CGAGCGCTGG
CAGAACACCG TCGGCGGCCT GCAGGACGCC ATGCGGGTGC AGGCCGGTGT CGTCGGCAAC
ATCGACACCA ACCGCGCCGA GATGTCGGCG CTCATCGGCC AAAGCCAGGG CGCGACCGGC
GCCTTGCAGG CGGCGCAGGC AGGCAATCAG CTCCTCGCGC TCCAGGCGCA GCAGCTCGCC
GATCTCACGG CCGTCGTCGC TGCGAACGGA CGAGCTCAAG CGCTGACCGA AGCGGAGCGT
GCGGCGGCTG CCGAGCAGGG CCGTGAGCAG CGCCGCCGCT TCCTGACGCC CGGCGTCGGC
TATCAGCCCG GCAACGCCCG CATGTTCCCG AATGGCAACT AA
 
Protein sequence
MIFRRSRAAL LAASILSVPV AMSPVMIQPA SAQWIVYDPT NYVQNVLSAA RALEQINNQI 
TSLQNEATML INQARNLASL PYSSLQRLQQ SVQRTQQLLG QAQRIAYDVQ QIDQAFTSTY
GNASMSASDQ QLVAQARERW QNTVGGLQDA MRVQAGVVGN IDTNRAEMSA LIGQSQGATG
ALQAAQAGNQ LLALQAQQLA DLTAVVAANG RAQALTEAER AAAAEQGREQ RRRFLTPGVG
YQPGNARMFP NGN