| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2879 |
|---|
| Symbol | |
|---|
| ID | 5420772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3204901 |
|---|
| End bp | 3205233 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640882133 |
|---|
| Product | conjugal transfer protein TrbC |
|---|
| Protein accession | YP_001417775 |
|---|
| Protein GI | 154246817 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0544772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC ATGCCCTGCG CGCTCGCCGT CATATCGCGA CGGCCGCGTC CGTCGCCGTC
TTCAGCATGA TGCTTGCGCC AGCAGCCCAT GCTTCCGGCT CTTCGATGCC GTGGGAAGCG
CCGCTGCAAT CGATCCTCGA ATCCATCGAG GGGCCTGTGG CCAAGATCAT CGCTGTGATG
ATCATCATCA TCACAGGGCT AACGCTAGCC TTCGGCGATA CGTCAGGCGG CGCGCGGAAG
CTGATCCAGA TCGTCTTCGG CCTGTCGATC GCCTTCGCCG CGTCGAGCTT CTTCCTGTCC
TTCTTCTCCT TCGGCGGCGG AGCGCTCGTC TGA
|
|---|
| Protein sequence | MIRHALRARR HIATAASVAV FSMMLAPAAH ASGSSMPWEA PLQSILESIE GPVAKIIAVM
IIIITGLTLA FGDTSGGARK LIQIVFGLSI AFAASSFFLS FFSFGGGALV
|
|---|
| |