| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2804 |
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| Symbol | |
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| ID | 5424714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3123371 |
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| End bp | 3124390 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640882057 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001417701 |
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| Protein GI | 154246743 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.433152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.469505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTGA CCCGTCGCAC CCTTTTCAAG GCCGGCGCGG CCGGAGCCCT TGCGGGCGGC
GTGTTCGCCC CCTTCGTCGC GCGGGCGCAG AGCGCGGAAT TCTCCTACAA ATACGCCAAC
AACCTGCCGG TCACGCACCC CATGAACGTG CGCGCGGGGG AGATGGTGGA CAAGATCAAG
GCCGAGACCC AAGGCCGCGT GGAGATCAAG GTGTTCCCCT CCAGCCAGCT CGGCGGCGAC
ACCGACATGC TGAGCCAGCT GCGCTCGGGC GGCATCGAGT TCTTCACCCT CTCCCCGCTC
ATCCTCTCCA CCCTGATCCC GAACGCCTCG GTGAGCGGCA TCGGCTTCGC CTTCCCGGAT
TACGCCACCG TGTGGAAGGC CATGGATGGC GGGCTCGGCG CCTATGTGCG CGGCCAGATC
TCCAAGGCCG GCATCATCGC CATGGACAAT ATCTGGGACA ACGGCTTCCG CCAGATCACC
ACCTCCACGA AGCCGATCGA GACCGCCGCC GACCTCAAGG GCCTGAAGAT CCGGGTGCCG
GTGTCGCCGC TGTGGACCTC CATGTTCCGG GCCTTCGACA GTGCCCCCGC GAGCCTCAAC
TTCGCCGAGG TCTATACCGC GCTCCAGACC CGCACCGTGG ATGCGCAGGA GAACCCGCTG
GCCATCATCG CCACGGCGAA GCTCTATGAG GTGCAGAAAT ACTGCTCCAT CACCAACCAC
ATGTGGGACG GCTTCTGGTT CCTCGCCAAC CGCCGCGCCT TCGAACGCCT GCCGGACGAT
CTGCGCGCTA TCGTGGCGAA GAACATCAAC GCCGCCGGCC TCAAGGAGCG CGAGGACGTG
CTGGTGCTCA ACGGCAACCT GCGCAAGGAG CTGAGCGAGA AGGGCCTCGC CTTCAACGAG
CCCAAGGTGG ACAGTTTCCG CGAGCAGCTG CGCAAGGCCG GCTTCTATTC CGAGTGGAAG
GGCAAGTACG GCGACGAGGC CTGGTCCATC CTGGAGAGCT ACACCGGCAA GCTGTCCTGA
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| Protein sequence | MMLTRRTLFK AGAAGALAGG VFAPFVARAQ SAEFSYKYAN NLPVTHPMNV RAGEMVDKIK
AETQGRVEIK VFPSSQLGGD TDMLSQLRSG GIEFFTLSPL ILSTLIPNAS VSGIGFAFPD
YATVWKAMDG GLGAYVRGQI SKAGIIAMDN IWDNGFRQIT TSTKPIETAA DLKGLKIRVP
VSPLWTSMFR AFDSAPASLN FAEVYTALQT RTVDAQENPL AIIATAKLYE VQKYCSITNH
MWDGFWFLAN RRAFERLPDD LRAIVAKNIN AAGLKEREDV LVLNGNLRKE LSEKGLAFNE
PKVDSFREQL RKAGFYSEWK GKYGDEAWSI LESYTGKLS
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