| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2781 |
|---|
| Symbol | |
|---|
| ID | 5425329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3080093 |
|---|
| End bp | 3080875 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640882034 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001417678 |
|---|
| Protein GI | 154246720 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.269223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC CACTGCGCCA TCCCTCTGCT TATTCGGCCT CTGCTTCTGT GGCCCCTGCT
TCATTCGCTT CCGCTTCCGC GGCGCTTTCG GGCGCGACGG CGAGCGCGCC CCTGTTCGAC
ACCCTCCTCG CCCACCGCGC CCGGCTGGTG CGGATGGCGT TCCGCATCGT CCAGTCCCGG
CATCTTGCGG AGGATGTGGT GGAGGACGTG GCGGTCAAGC TCTGCGAGGG CGAGGGGGTG
ATCGCGGCGG ACCATCCGGC GCCGTTCCTC TACCGCCTGG TGCGCAACCT TGCCATCGAC
CGGGCGCGCC GGCTGAAGCG CGAGCGCAGT CTCGCCGGCA GCGCGGAGGA GGCCGCCCAC
GTGGCCATGC CCTGCGCCTG CCCGCTGGAG CGCCTGGAGC AGCGCGAGAT GCTGGAGGTG
GTGATCCGCG CCCTCGACAC CCTGCCGCCG CGCACCCGCC TCGCCTTCCT GCGCCATCGC
ATCGACGGCA TGCCGCAGAA GGACATCGCC GAACATCTGG GGGTGTCGCG CACGCTGGTG
AATTTCATGG TGCGCGACGC CACCAAGGTC TGCCGCGACA GCATCGACGC CTATTGTGGG
CGCACCACCG CCCGCTGTCC CAAGGCAAGC TGCCCCAAGG CGCGCGCGGC CAAAACACCT
GCCCCTGAAA AGGCTCAACT GGACCAGGCG CAGCCGGAGA AGACGCCGCG TCCCGCCCCG
CGCTGCCCGC TGTCAGAGCG ACACCCCAAC GTCCGCGGCG CGGCGTCCAA GGCGGTCGCA
TGA
|
|---|
| Protein sequence | MTAPLRHPSA YSASASVAPA SFASASAALS GATASAPLFD TLLAHRARLV RMAFRIVQSR
HLAEDVVEDV AVKLCEGEGV IAADHPAPFL YRLVRNLAID RARRLKRERS LAGSAEEAAH
VAMPCACPLE RLEQREMLEV VIRALDTLPP RTRLAFLRHR IDGMPQKDIA EHLGVSRTLV
NFMVRDATKV CRDSIDAYCG RTTARCPKAS CPKARAAKTP APEKAQLDQA QPEKTPRPAP
RCPLSERHPN VRGAASKAVA
|
|---|
| |