Gene Xaut_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2706 
Symbol 
ID5423682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2997326 
End bp2998579 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID640881960 
Productextracellular ligand-binding receptor 
Protein accessionYP_001417604 
Protein GI154246646 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACG AAACGAGTCC GCGCTCCGGC GCATTCGCCA TCAATCGACG CAACCTGCTG 
CTCGGCGCGA CCGCCGGCGC CATCGCCATG CCGTGGGTCA GCCGCGCCCA TGCAGCCGAG
CCGATCCGCA TTGGCATGCT CTACGGCAAG ACCGGCCCCA TCGTCGGCCA GTCCGAGCAT
CTCGCCCAGG GCAGCTTCCT TGCGCTGGAA CAACGCGGCG GCACCCTGCT CGGGCGGCCG
ACGGAGATTG TCTGGCTGGA TGAACCCAAT CCACAGGGCG CCCAGCAGAA TGCCGAGCGC
CTGGTCGGCG AGCACAAGGT GGCCGGCCTT GTCGGCGGGG CGCTCTCGTC CCACGCCTTC
GCCATCTCGG CGGTGGCCAA GAAGGCAAAG GTGCCCTTCA TAGCGACCAA TGCCGCGGCC
GACGCCCTGA CCGGAGCGTC CTGCAATCGC TACACTTTCC GCACCCAGGC CCCGGTGGAG
GTGCAGGCCC GGGTGCTGGC CCCCCAGGCC GCCGCCATCG GCAAGAAATG GTACCTGCTG
ACAGCCGCCT ATGCCTTCGG CCAGGACGTC AAGCGCTTCT TCGGCCAGTA CGCCAAGGAC
AACGGCGGCA CCATCGTGGG TGCCGATGAC GTGCCCGTGG GCACGCAGGA CTTCTCCTCC
TTCATTCTGA AGATTCGCGC CGCCAAGCCC GACGTCGTCA TCGGCGGCAT CGCCGGCAGC
GACCTCATGG GCTTCCTGAA GCAATGGAAC GAACTGGGCA TGCGTGGTCG CATCCCGTTC
GCGGAAATTG CGGTAGGCAA CACCGACCTG TGGGGCGTGG GACCCGAGGC CGCCGACGGT
CTCTACACCA GCACCTGGTA CTACAAGAAC CCCGCCAATC CGCCAGATGA ACAGGCCATG
ACGGCGGCAT ACGAGAAGAA ATACAATCGC CCTCCAGCCG ACAAGGCCTG GATGGGATGG
TTCGGCACCA ACATCCTTCT TGATTCCATC GAGGCCGCCG GCTCCACGGA CCCGACGGCG
GTCGTCAACG CAATCGAGCG CTGGCAGACC AAGCGCGGCG GGACGCGCGA GATCTCCTTC
CGGCCCTTCG ACCACCAGTT GACGAGCACC GTGGTCGTGC TCGGCGTGAA GCCGAAGATT
ACCGACAAGT GGGACTTCTT CGACGTCAAG GCGGAGGTGC CGAAGACCGA GGCCGAGGCG
AACGCCCTCT ACGGCCCCGA GAGCGCCTCG GCCTGCAAGA TGGAAAGCAT CTGA
 
Protein sequence
MGDETSPRSG AFAINRRNLL LGATAGAIAM PWVSRAHAAE PIRIGMLYGK TGPIVGQSEH 
LAQGSFLALE QRGGTLLGRP TEIVWLDEPN PQGAQQNAER LVGEHKVAGL VGGALSSHAF
AISAVAKKAK VPFIATNAAA DALTGASCNR YTFRTQAPVE VQARVLAPQA AAIGKKWYLL
TAAYAFGQDV KRFFGQYAKD NGGTIVGADD VPVGTQDFSS FILKIRAAKP DVVIGGIAGS
DLMGFLKQWN ELGMRGRIPF AEIAVGNTDL WGVGPEAADG LYTSTWYYKN PANPPDEQAM
TAAYEKKYNR PPADKAWMGW FGTNILLDSI EAAGSTDPTA VVNAIERWQT KRGGTREISF
RPFDHQLTST VVVLGVKPKI TDKWDFFDVK AEVPKTEAEA NALYGPESAS ACKMESI