Gene Xaut_2674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2674 
Symbol 
ID5423071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2963667 
End bp2964185 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content57% 
IMG OID640881928 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001417572 
Protein GI154246614 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.224845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0965747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCGAC GCATTGAACA GCACCTGTTG AAGAATTGGA GCCTCCTTTG GGGCTATGCC 
CTGCGCCTGA CGGGCGACCG GGAATCCGCT TCAGATTTGG TGCAGACGTG TGCAGTGAAA
GCGCTTGCAA GCGCCTCGCC CCCCTGCGAC GAAATTGCCG CCCGTATATA TCTGTTCAAG
GTTATTCGAA ACGCCTGGAT TGATGATTTC CGCCGCGCCA AAGTGCGGTG TGACGATTCT
GCAGTCAAAC CATTGGACGG AACCGTTTGG AATTACGATG ACAGGTTGAT CGCTGAAATT
ACCGTGCGGC AGGCTGTTGC ACAGATCGAG CCGGTCTATC GCGAAATCAT CGAGATCGTT
GATCTTGCCG GCTTCCGCTA TGTGGAGGCC GCGGAAATAC TCGATATTCC CCTCGGGACT
GTGATGAGCC GCTTGAGCCG TGCGCGGGCG GCGCTGCTCG ACCGGATTAC GGCCGACAAC
ATTCGCCCCA TTGCGACAGA CAGACGCCAT GCCAGATGA
 
Protein sequence
MLRRIEQHLL KNWSLLWGYA LRLTGDRESA SDLVQTCAVK ALASASPPCD EIAARIYLFK 
VIRNAWIDDF RRAKVRCDDS AVKPLDGTVW NYDDRLIAEI TVRQAVAQIE PVYREIIEIV
DLAGFRYVEA AEILDIPLGT VMSRLSRARA ALLDRITADN IRPIATDRRH AR