| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2673 |
|---|
| Symbol | |
|---|
| ID | 5423070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2962865 |
|---|
| End bp | 2963677 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640881927 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_001417571 |
|---|
| Protein GI | 154246613 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.105923 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGATG AAAAGCCGAT ATCCGAGAGT CTCCCAGACA CCATGACCTG GGAGATTCTG
AACGCTTATG TCGATCAGGA GCTTGATCCC CGACGAGCGG CCCTCGTCGC TGACGCTGTG
GCCCGCGATC ATGGCCTGGC GGCGCGCGTC GCCACATTGA GCAAGCTCAG GGCGACGGCG
AGAGAAATGC CCCCTGCATC GCATGCGCCA CCGCCGCTTG CGCTCCGGAC ATTTGCCGGA
TTTTGGTCCC TGCGCGTCAT GGCTGTAGCA GCGTCTATTC TGCTCGCCGT CGTCCTTGGC
AGCACTCTCC TTTGGCGTGG GCCTGCGGGG GAAAATGCAT CCAGAGACGC GGCCGATGCT
ATCCATCTCG AATGGCTTTC CGATCAGTCC CTCCCTCCGA AAGACGCTCC TATCGAGTTC
GCTTTGGCTT CGCGATTTAT GGGAACATTG CCCGACTTGT CCGCCGCGAA CCTCAGATTG
GTGTTTTTGT CGGCGGAACC AGTGGTGGAG GGCCATGGGG TCTTTGGCGG TTACGTTGGC
CCTCACGGAT GCCGGCTCGG TCTATCGATC ACGCCGTCGC GCGGGGGCGA CACGACTATC
CGGGAGGGCC GGGAGCCGGG CGGCATGCTC ATTCGCGCCT GGCGGTCTGA CGGGGCGGAG
TACGCGATCA TGAGCCACAG CATGGATCCG GACAGGCTCG ACCGCCTGGC GCTGATTGTC
GCTGAACTGG TGCGGCAGCG TGGTCCGACG ACGGACGAGC AGGAGATTGC CTTGCGCGCG
ACGGAGACCG TCGGAAAGGC GTGCGCGGTT TAG
|
|---|
| Protein sequence | MPDEKPISES LPDTMTWEIL NAYVDQELDP RRAALVADAV ARDHGLAARV ATLSKLRATA
REMPPASHAP PPLALRTFAG FWSLRVMAVA ASILLAVVLG STLLWRGPAG ENASRDAADA
IHLEWLSDQS LPPKDAPIEF ALASRFMGTL PDLSAANLRL VFLSAEPVVE GHGVFGGYVG
PHGCRLGLSI TPSRGGDTTI REGREPGGML IRAWRSDGAE YAIMSHSMDP DRLDRLALIV
AELVRQRGPT TDEQEIALRA TETVGKACAV
|
|---|
| |