Gene Xaut_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2646 
Symbol 
ID5422095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2939798 
End bp2941405 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content68% 
IMG OID640881900 
Productpeptide chain release factor 3 
Protein accessionYP_001417545 
Protein GI154246587 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4108] Peptide chain release factor RF-3 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC AGACGCCCAA CGCCGCCCTC GCGGACCTGC CGGATTTCGC CCGCCGGCGC 
ACCTTCGCCA TCATCTCCCA TCCGGACGCC GGCAAGACGA CGCTGACGGA AAAGCTGCTG
CTTGCCTCCG GCGCCATCCG CATGGCCGGC CACGTGAAGG CGCGCGGCGA GCGCCGCCGC
ACCCGCTCCG ACTGGATGGA GATCGAGCAG CAGCGCGGCA TCTCGGTCAC CTCCTCGGTG
ATGACCTTCG AGCGCGACGG CATCGTCTTC AACCTGCTCG ACACCCCCGG CCACTCGGAC
TTCTCCGAGG ACACCTATCG CACCCTCTCG GCGGTGGACG CGGCGGTGAT GGTGATCGAC
GCCGCCAAGG GCATCGAGAG CCAGACCCGC AAGCTGTTCG AGGTCTGCCG CCTGCGCGAC
ATTCCCATCT TCACCTTCGT CAACAAGGTG GACCGCGAGA GCCTCGACCC CATCGCCCTG
ATGGACGAGG TGTCCTCCAC CCTCGCCCTC GACCTCACCC CGCTGACCTG GCCCATCGGC
ATGGGCGTCG ATTTCCGTGG CCTCATCGAC ATCGCCAACA AGAAGGCCCT GCTCGCCACC
GAGCGCGGCG GGCCGCTGGT GCGCGAGGTG CCGTTCGAGA CGCCGGAGGA CCTCATCGAC
CTCGAAGGGG TGGAGGAGCG CATCATCAAC GAGGCCGTGG AGAGCCTGAC GCTGGCGCTG
GGCGTGCTGC CGCCGTTCGA GCTGGCCTCG TTCCGCGAGG GGCATCTCTC CCCGGTCTAT
TTCGGGTCGG CGCTGAAGGA GGCGGGGGTC GCCGAGCTGC TGTTCGGCCT CGGCTCGGTC
GGCCCGAGCC CGCTGCCGCG CTCCGCCGCC GGGGATCGCA CCGTCGAGCC GGCGGAGGAC
CTCGTCTCCG GCTTCGTCTT CAAGGTGCAG GCCAACATGG ATCCCAACCA CCGGGACCGC
GTGGCCTTCG TGCGCCTGTG CTCGGGCCGC TTCAAGCGCG GCATGAAGCT GTTCAACCCG
CGCGAGAAGC GCCAGATGGC CATCGCCAAC CCCATCTTCT TCTTCGCCCA GGAGCGCGAG
ACGGTGGACG AGGCCGTGGC TGGCGACATC ATCGGCATTC CCAACCACGG CATGCTGCGG
GTGGGCGATA CCCTCTCCGA GGGCGAGACC ATCAAGTTCG AGGGCCTTCC GGACTTCGCG
CCGGAAATCC TGCGCCGGGT GCTGCTGTCC GACCCCATGA AGGCCAAGCA GCTGCAGAAG
GCGCTGCAGG ACATGGCGGA GGAGGGCGTG GTGCAGGTCA TCAAGCCCGT CTCTGATCCC
TCTCCTATCG TGGGCGTGGT GGGCACTCTG CAGCTCGACG TGCTCGCCGC CCGGCTGGAG
AAGGAATACG GCGTGCCCAT CCGCTACGAG ACGGTGTCCT TCGTCACCGC CCGCTGGATC
GTGGGCGAGC GCGCCGAGGT GGACCGCTTC ATGGAGGCGA ACCGCTCCTC CACCGCCCGC
GACCGCGACG AGGCGCCGGT CTATCTCGCC CGCAGCCAGT GGGTGCTGGA CCGCGCCATC
GAGGAATGGC CCAAGCTCAA GTTCGTCGCC GTGAAGGAAC GCGGCTGA
 
Protein sequence
MLDQTPNAAL ADLPDFARRR TFAIISHPDA GKTTLTEKLL LASGAIRMAG HVKARGERRR 
TRSDWMEIEQ QRGISVTSSV MTFERDGIVF NLLDTPGHSD FSEDTYRTLS AVDAAVMVID
AAKGIESQTR KLFEVCRLRD IPIFTFVNKV DRESLDPIAL MDEVSSTLAL DLTPLTWPIG
MGVDFRGLID IANKKALLAT ERGGPLVREV PFETPEDLID LEGVEERIIN EAVESLTLAL
GVLPPFELAS FREGHLSPVY FGSALKEAGV AELLFGLGSV GPSPLPRSAA GDRTVEPAED
LVSGFVFKVQ ANMDPNHRDR VAFVRLCSGR FKRGMKLFNP REKRQMAIAN PIFFFAQERE
TVDEAVAGDI IGIPNHGMLR VGDTLSEGET IKFEGLPDFA PEILRRVLLS DPMKAKQLQK
ALQDMAEEGV VQVIKPVSDP SPIVGVVGTL QLDVLAARLE KEYGVPIRYE TVSFVTARWI
VGERAEVDRF MEANRSSTAR DRDEAPVYLA RSQWVLDRAI EEWPKLKFVA VKERG