Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2633 |
Symbol | |
ID | 5422274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2922175 |
End bp | 2924064 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640881887 |
Product | extracellular solute-binding protein |
Protein accession | YP_001417532 |
Protein GI | 154246574 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.350381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.525149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT CGCGCCGCAC GCTGCTGCTG TCCGCCGCCT CCGCCGTCAC CTTGCTGCCG GCCATGGCAC GTGGGCAGCC GGCGCCGCAG GACGCGGCGG CGAACGAGGG CGCGGCCGCC TCCGCCGCGG TGGAGCGGCA CGGCCTGTCC TTCTTCGGCG ACCTGCGGTA TCCGGCCGGC TTCACCCATT TCGACTATGT GGACCCGGAC GCGCCCAAGG GCGGTCCCTT CTCCCAGATG GGCCGGGCGA CCTTCTACAA CCAGTCGCTC AACACCTTCG ACACGCTGAA CCCCTACAAC CAGCGCGGCA ACGGCGCCCA GGGCATCGAG CTGATCTACG ATACGCTGAT GACCGCCGCC GGCGACGAGA AGAGCGCCAT GTACGGCCGC CTCGCCAGCT CGGTGGTGAT CGCCGACGAG GGGCTCACCT ACCGCTTCAA GCTGCGCCCG CAGGCGCGCT TCCATGACGG CACGCCTGTG ACGGCGGACG ACGTGGTGGC GACCTTCGAG GCCTTCAAGG CCGACGCCTA CGAGACCATC CGCATGGCCC TGCGCGATCT CACCGCCGTG GAGGCGGATG GGCCGGGCGA GGTGGTGATG CGCTTCCGCC CCGGCCGCGC CCGCGACGTG CCGCTCACCG CCGCCGGACT GCCGATCTTC TCTCGCGCCT TCCTGGCGAA GCACCCGTTC AACCAGTCCT CGCTGGAAGT ACCGCTGGGC TCGGGGCCAT ATCGGGTGAA GAAGTTCGAG CAGGGCCGCT TCATCGAATA TGAGCGGGTG CCCGACTATT GGGGCCGCGA CCTGCCGGTG ATGAAGGGCC GCTTCAACTT CGACACGGTG CGCTACGAAT ATTTCCGCGA CCGGGTGGCG GGCCTGGAAG GCTTCAAGGC CAGGGCCTAT CTGTTCCGCG AGGAGTTCAC CGCTCGCGAA TGGGCCACCG CCTATGATTT CCCCGCCGTG CGCGAGGGGC GGGTGAAGGT GGAGACCCTG CCGGACAATT CCTTTTCCGG CGTGCAGGGC TGGTTCTTCA ACACCCGCCG CCCCAAGTTC TTCGACCGGC GCGTGCGCGA GGCCATCGGG ATCCTGTTCG ACTTCGACTG GACCCGCAAG AACCTGATGT ACGATAGCTA CACCCGCACC GTCTCCTTCT TCCAGAATTC GGAGATGATG GCGCAGGGGC TGCCCTCGCC CGCCGAACTG AAGCTCTTGG AACCGTTCCG CGACCGCCTG CCGGAAGAGG TGTTCGGCGA GCCCTATGTC CCGCCGGTCT CCGACGGCAG CGGAGAAGAC CGCAACCTGC GCCGGCAGGC CCTCGCCCTC CTGAAGGATG CCGGCTGGAA CGTGCAGCAG GGCAAGCTCG TCGACGCCAA GGGCGAGGCC TTCACCATCG AGTTCCTGGA TGATGACGGC GGCATGGAGC GCCATACGGC GCGCTTCATC GGCCACCTGA AGAAAGTGGG CATCGACGCC ACCTTCCGCA TCGTGGACCC GGCCCAGTTC CAGCTGCGGC TGCAGGGCTT CGACTTCGAC ATGGTGGTGC GCCGCTATTC CTTCGCGCCC TATCCGGGCG ACGAACTGCG CGCCTATTTC TCGACCGAGG CGGCGCGCAC CCGCGGCTCC TACAACGTGG CCGGCATCGC CGACCCGGCG GTGGACGGGC TCATCAACGC GGCGCTGGCC GCCCCGGACG CTGCCGCCCT CGTGGTCGCC TGCCAGGCGC TGGACCGGGT GCTGCGTGCC GGGCGCTACT GGATCCCCCA GTGGTATTCC GGCCAGCACC GCATCGCCTA CTGGAACCAG TTCGCCCGCC CTGCCACCAA GCCGCGCTAC GACCTGGGCG CGCTCGACAC CTGGTGGAGC ACCGGCACGG AGCCGGCCAG AGGCGGGTGA
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Protein sequence | MSLSRRTLLL SAASAVTLLP AMARGQPAPQ DAAANEGAAA SAAVERHGLS FFGDLRYPAG FTHFDYVDPD APKGGPFSQM GRATFYNQSL NTFDTLNPYN QRGNGAQGIE LIYDTLMTAA GDEKSAMYGR LASSVVIADE GLTYRFKLRP QARFHDGTPV TADDVVATFE AFKADAYETI RMALRDLTAV EADGPGEVVM RFRPGRARDV PLTAAGLPIF SRAFLAKHPF NQSSLEVPLG SGPYRVKKFE QGRFIEYERV PDYWGRDLPV MKGRFNFDTV RYEYFRDRVA GLEGFKARAY LFREEFTARE WATAYDFPAV REGRVKVETL PDNSFSGVQG WFFNTRRPKF FDRRVREAIG ILFDFDWTRK NLMYDSYTRT VSFFQNSEMM AQGLPSPAEL KLLEPFRDRL PEEVFGEPYV PPVSDGSGED RNLRRQALAL LKDAGWNVQQ GKLVDAKGEA FTIEFLDDDG GMERHTARFI GHLKKVGIDA TFRIVDPAQF QLRLQGFDFD MVVRRYSFAP YPGDELRAYF STEAARTRGS YNVAGIADPA VDGLINAALA APDAAALVVA CQALDRVLRA GRYWIPQWYS GQHRIAYWNQ FARPATKPRY DLGALDTWWS TGTEPARGG
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