| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2530 |
|---|
| Symbol | |
|---|
| ID | 5425136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2827403 |
|---|
| End bp | 2828494 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640881784 |
|---|
| Product | lysine--tRNA ligase |
|---|
| Protein accession | YP_001417429 |
|---|
| Protein GI | 154246471 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.83 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTAT CGACGCCCGG CACAAGCCCC GATCCCAGCG CCAATCCCAG CCCCAATCCC
AGCCCATGGT GGAGCCGCTC CGTCCACGCC GACCGGCGGC CGTTCCTGCT GGCGCGCGGG
CGCATGATGG CGGCGATCCG CGCCCGCCTT GCCGGCGAAG GCTTCATTGA GGTGGAGACG
CCGGCGCTCC AGGTCTCGCC CGGCAACGAG GCGCACCTGC ACGCCTTCGC CACCGACCTC
ATCGGCCCGG ACGGTGCCCG GCGCACGCTC TATCTGCGCA CGTCGCCGGA ATTCGCCTCC
AAGAAGCTGC TGGCGGCGGG GGAAGAGCAG ATCTTCGAGT TCGCCCGTGT GTTCCGCAAC
CGGGAGCGCG GCATGGCCCA CCATCCCGAG TTCACCCTGC TGGAATGGTA TCGGGCCGGT
GCGCCCTATA ACCGGCTCAT GGACGACTGT GCCGGCCTTC TCGCCTGTGC CGCCGAGGCC
GGCGGCGTGT CGACCTTCGC CTGGCGGGGA CACACCTGCG ACCCCTTCGC CGCGCCGGAG
CGGCTGACGC TGGAAGAGGC GTTCGCGCGC CACGCCGGCA TGGCTCTGGC CACGGTGCTG
CCCGCCCCCG GCGAGCGGCC CGATCCGAGG CCGTTTGCCG AGCTGGCGGC GGCGCACGGC
ATCCGCACCG CGCCGGACGA CACCTGGGCG GACATCTTCT CGCGGGTGCT GGTGGAAAAG
ATCGAGACCC GGCTCGGCAT GGGGCGGCCC ACGGTGCTGT GCGACTATCC GGTGAGCGAG
GCGGCGCTGG CCCGGCCCAA GCCGGAGGAT CCGCGCTTCG CCGAGCGCTT CGAGCTTTAT
GCCTGCGGGC TGGAGCTGGC CAATGCGTTC GGCGAACTGA CCGACGCCGA CGAGCAGCGC
CGGCGCTTCG AGGAGGAGAT GGACGAGAAA GAACGGCTCT ATGGCGAGCG CTATCCCATC
GATGCCGATT TCCTGGCCGC TCTGGCGGCG ATGCCGCCCG CGAGCGGCTG CGCCCTGGGC
TTCGACCGCC TCGCCGTTCT GGCCAGCGGC GCGCGTCGCA TCGAGGACGT GCTGTGGGCA
CCGGTGGGCT GA
|
|---|
| Protein sequence | MAVSTPGTSP DPSANPSPNP SPWWSRSVHA DRRPFLLARG RMMAAIRARL AGEGFIEVET
PALQVSPGNE AHLHAFATDL IGPDGARRTL YLRTSPEFAS KKLLAAGEEQ IFEFARVFRN
RERGMAHHPE FTLLEWYRAG APYNRLMDDC AGLLACAAEA GGVSTFAWRG HTCDPFAAPE
RLTLEEAFAR HAGMALATVL PAPGERPDPR PFAELAAAHG IRTAPDDTWA DIFSRVLVEK
IETRLGMGRP TVLCDYPVSE AALARPKPED PRFAERFELY ACGLELANAF GELTDADEQR
RRFEEEMDEK ERLYGERYPI DADFLAALAA MPPASGCALG FDRLAVLASG ARRIEDVLWA
PVG
|
|---|
| |