| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2516 |
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| Symbol | |
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| ID | 5424935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2810385 |
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| End bp | 2811392 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640881770 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001417415 |
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| Protein GI | 154246457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0775075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCC CTGCCATGAC TTTGTCCCGT CGTCATTTCC TCATGAGTGC CGCCGCCGGC
GCCGCCCTTC CGCTTGCCAT GCCCAACGTG GTGCGGGCCC AGGAGGCGCG GGAATTCCGC
CTCGGCATTA TCACCCCCGG CGGCCATCCC TGGAACGTGG CCGCCGACAA GGTGGGGGCC
ATGCTGAAGG AGGAGACCAA AGGCCGCCTC TCCATCACCG TCTTCCCCTC GGGCCAGCTC
GGCAACGAGG CGGCCATGCT GCAGCAGATG CAGACCGGCG CCCTCGACAT GGGCTGGATC
ATGACCGCGG AACTGGGCTC GCGGGTGCCG GCCATCGCCG CCATCAATGC CCCGTGGGTG
GTGGATTCCA CCGCCAAAGC CGGCAAGCTG GTGCGCACCC CGGTGGCCAT GAGCCTGCTC
GACGTGCTGC CCAAGGAGAC CGGGACGGTG GGCCTGGCCT GGGGCATCAC CACCATGCGC
GTCGTGTTCT CCGCGAAGCC CATCACGGGC ATCAAGGACC TCAACGGCAT GAAGCTGCGC
ATCAACACCA CGCCGGCCTA TCGCGACTTC TACCAGCTGC TCGGCGCCGC CCCGACGCCC
ATCCCCACCC CGGCGGTGTT CGACGCCATG TCCAACGGCC AGGTGGACGG CCTTGAGGCC
GACCTCGACT TCTCCTGGAA CCAGCGCTTC GACAAGGTGT CGAAGACCAT GCTGAAGATG
GACGCCATCT TCATGCCGGT CATCGCGCTG GTCTCGGGCC GCGTCTGGCA GACCCTTTCG
CCCGCCGACA AGGCGCTCAT CAGCAAGCTC ACCAAGAGCG CCCTCGACGC CCAGGTGGAC
GAGACCGTGG TGAACGAGCC GGTGCTGCTG GAGAAGTTCA AGGCGGTGAT CCCGATCAAG
GTGGCGGAAG TGGCCGACCG CGAGAAGATC ATCGCCGAAT ACGACAAGAT CTGGCTGCCC
AAGGCCCCGA TCCTCGCCGA CCTGCGCAAG GCCGGCGCCG CCCTCTGA
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| Protein sequence | MSRPAMTLSR RHFLMSAAAG AALPLAMPNV VRAQEAREFR LGIITPGGHP WNVAADKVGA
MLKEETKGRL SITVFPSGQL GNEAAMLQQM QTGALDMGWI MTAELGSRVP AIAAINAPWV
VDSTAKAGKL VRTPVAMSLL DVLPKETGTV GLAWGITTMR VVFSAKPITG IKDLNGMKLR
INTTPAYRDF YQLLGAAPTP IPTPAVFDAM SNGQVDGLEA DLDFSWNQRF DKVSKTMLKM
DAIFMPVIAL VSGRVWQTLS PADKALISKL TKSALDAQVD ETVVNEPVLL EKFKAVIPIK
VAEVADREKI IAEYDKIWLP KAPILADLRK AGAAL
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