| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2515 |
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| Symbol | |
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| ID | 5424934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2809095 |
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| End bp | 2810360 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640881769 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001417414 |
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| Protein GI | 154246456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0470341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCA CCGCCGCATT CCTCATCACC ATGCTGGTGG GCGTGCCCAT CAGCCTGTGC
CTGGCCCTGT CGGGGGTGGC GTTCATCCTC GCCACCGGCA ATCCGCTGCT GCTGCAGACC
TTTCCCACCC AGCTGTTCGG CGGCGTGGAC AGCTACGGCC TCATCGCCAT CCCGCTGTTC
GTGCTGATCG GCGAGATCAT GAACGGCGGC GGCATCACCC GCCGGCTCAT CGACATGGCC
ATGGCGGTGG TGGGCCGCAT GCGCGGCGGC CTCGCCTATG TGAACCTCAT CGCCAACATG
CTGGTCTCGT CCATCCTCGG CTCGGCCACG GCGCAGGTGG CCATCATGGC GCAGATCCTG
GTGCCGGAGA TGGAGAAGAA GGGCTACGAC AAGACCTTCG CCGCCGGCCT CACCGCCTAT
GCGGGCATGC TGGGACCCAT CATCCCGCCG TCCATCATGT TCGTGGTGTA TTCAGTGCTG
GCGCAGGTCT CGGTGAGCGA CATGCTCATC GCCGGCATCA TCCCCGGCGT GCTTTTGACC
GGGCTGTTCT GCCTGTGCGT CTACATCATG GGCTTCTTCT ACAATTACCC CCGCGGCGAA
AGCATGACCT GGCGCCAGCG GGCGGACATC GTGCTGAATG CCATCCCCAC CCTGCTCATC
CCCATCGTCA TCGTCGGCTC CATCCTCACC GGCCTTGCCA ATGCGACGGA ATCGGCGGCG
GTGGGCGCGC TCGCGGCGCT GCTCATCGGC CGCTACTGGA CCAAGGAATT GTCCTTCTCC
CAGCTGCCGC AGATGCTGCT GAAGGCCGGG CTGTATTCGT CCGTCATCCT GTTCCTGGTG
GCGGTGGCGG CGGTGTTCTC CTGGGTGCTG GTCTACGGCA AGGTCCCGCA GGCGGTGGCG
GCCTGGGTGC AGACCGTGGC CCATGACCCC ATCAGCTTCA TGCTGCTGGT CAACGTGATC
CTGCTGGTCA TCGGCACGGT GATCGACGGC GCGCCCGGCC TCATCATGAC GGTGCCGATC
CTTCTGCCCA TCGCCGTGGA TGTCTACCAC ATCGATCCCG TGCATTTCGG CGTGGTGGTG
GTGATCAACC TTGTCCTCGG CTTCCTCTCC CCGCCGGTAG GCCTGTGTTT CTTCGTCGCC
TCCGCAGTTA CGGGGGCGAA GGTGGGGCGG ATGTTCTACG TCACCCTGCC GTTCTTCTTC
GCCGCCTGCG CGCTTCTGGT GCTGCTGTCG CTGGTGCCGT GGCTGTCGAC CGTCCTCGTC
AAATAA
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| Protein sequence | MVTTAAFLIT MLVGVPISLC LALSGVAFIL ATGNPLLLQT FPTQLFGGVD SYGLIAIPLF
VLIGEIMNGG GITRRLIDMA MAVVGRMRGG LAYVNLIANM LVSSILGSAT AQVAIMAQIL
VPEMEKKGYD KTFAAGLTAY AGMLGPIIPP SIMFVVYSVL AQVSVSDMLI AGIIPGVLLT
GLFCLCVYIM GFFYNYPRGE SMTWRQRADI VLNAIPTLLI PIVIVGSILT GLANATESAA
VGALAALLIG RYWTKELSFS QLPQMLLKAG LYSSVILFLV AVAAVFSWVL VYGKVPQAVA
AWVQTVAHDP ISFMLLVNVI LLVIGTVIDG APGLIMTVPI LLPIAVDVYH IDPVHFGVVV
VINLVLGFLS PPVGLCFFVA SAVTGAKVGR MFYVTLPFFF AACALLVLLS LVPWLSTVLV
K
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