| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2499 |
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| Symbol | nirA |
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| ID | 5421041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2792984 |
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| End bp | 2794744 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640881753 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_001417398 |
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| Protein GI | 154246440 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCG ACTTTACCAT CGACCAGAAA CGCTATCTGG AAGGCTTCGT CTCCGGCGCC
AAGGCGGTGC AGATCACCCG GGGCGCTGCG CCCGCAGGCG CGCCTGCCGC TGCCGCCGAG
CCCACCGGCC CCGACGCAGC GAGCCTGAAG GCCATGGCTC GCTTCGAGGC GGAGGGCAAA
AAGCTCTCGC CGGAGGAGAA GGGCAAGCGC GAGGAACTGG GCCTTGATGC CTACCCCCGC
ATGAGGACCG CCGCCCACGA GGGCGTCTTT CCCAAGGGCC CGGACGTGCT CCGCTGGAAG
TACCACGGTC TGTTCCATGT GGCGCCGGCG CAGGACAGCT TCATGTGCCG CCTGCGCATT
CCCAATGGCA TCCTCACCCA CTGGCAGTTT CGCGGCGTCG CCGACATCGC GTCCGCCCAC
GGCGGCAACT ACACCGACGT GACCACGCGG GCCAATCTGC AGATCCGCGA GATCCCGGCC
ACCGACGGCA TCGCCGTGCT GGAAAAACTG GTGGACCTCG GCCTCACCGC CAAGGGCTCT
GGGGCGGACA ATATCCGCAA CGTGACCGGC ACCCCCACCG CCGGCATCGA CCCGCAGGAG
TTGCTCGACA CCCGGCCGCT GGCGAAGGAG TGGCACCACT ACATCCTCAA CAATCGCGAC
ATGTACGGCC TGCCGCGCAA GTTCAACGTG GCCTTCGACG GCGCCGGCAC CATCGGCGCG
CTGGAGGACA CCAATGACAT CGGCTTCCAG GCGGTGGAGG TGAAGGACGG GTTCGGCGTG
GCGCCGGGCA TCTGGCTGCG GCTCGCCCTG GGCGGCATCA CCGGCCACAA GGATTTCGCC
CGCGACACCG GCATCGTGGT GCGCCCCGAC GAGGCGAGCG ACGTGGCCGC CGCCATCGTG
CGCGCCTTCA TCGACACCGG CGACCGCACC GACCGCAAGA AGGCGCGGCT GAAATACGTG
CTCGACGCCA TGGGCTTCGA CGGTTTCCTG ACGCTGGTGG AAAAGAAGCT GGGCCGTCCC
TTCACCCGCC TGCCGGCGGA AGCGGTGGCA CCCCGCGCCG AGGCCGACCG CCTCGCCCAT
CTCGGCGTTC ACGCCCAGAA GCAGCCGGGG CTGAATTACA TCGGCGTCGG CCTGCCGGTG
GGCCGCATGA GCGTGGAGCA GATGCACGGC CTCGCTGACA TCGCCGCGCG CCTCGGCGAC
GGCGACATCC GCCTCACGGT CTGGCAGAAC CTGCTCATCT CGGGCGTTGC CGACGCGGAC
GTGGCGCAGG CGTGCACCGC CATCACGGCG CTCGGGCTGT CCACCCAGGC GACGCCGCTC
CAGGCCGGCC TTGTGGCCTG CACGGGATCC AAGGGCTGCC GCTTCGCCGC CGCCGACACC
AAGGGCACGG CCCGCGCCAT CCTCGCCCAT TGCGAGGAAC GCCTCGACCT CGACGGGCCG
GTGAACATCC ATGTCACCGG CTGCCACAAT TCCTGCGCCC AGCATTATAT CGGCGACATC
GGCCTCATCG GCGCGCGGGT GGCCATCAAT GACGATGGCG ACACGGTGGA CGGCTATCAC
CTGTTCGTCG GCGGCGGATT CGGCGCGGAC GCCGCCATCG CCCGCGAACT CTATCGCGAC
GTGAAGGCGG AAGACGCCCC CGCGGTGGTG GAGCGCCTGC TGAAGAGCTG GCTCGCCCAC
CGCGAGGAGG GCGAGGCATT CGCGCACTTC ACCCGCCGCA TGGACCCCGA CGCGCTGAAG
GCGCTGGCGG AGGTGGCATG A
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| Protein sequence | MGSDFTIDQK RYLEGFVSGA KAVQITRGAA PAGAPAAAAE PTGPDAASLK AMARFEAEGK
KLSPEEKGKR EELGLDAYPR MRTAAHEGVF PKGPDVLRWK YHGLFHVAPA QDSFMCRLRI
PNGILTHWQF RGVADIASAH GGNYTDVTTR ANLQIREIPA TDGIAVLEKL VDLGLTAKGS
GADNIRNVTG TPTAGIDPQE LLDTRPLAKE WHHYILNNRD MYGLPRKFNV AFDGAGTIGA
LEDTNDIGFQ AVEVKDGFGV APGIWLRLAL GGITGHKDFA RDTGIVVRPD EASDVAAAIV
RAFIDTGDRT DRKKARLKYV LDAMGFDGFL TLVEKKLGRP FTRLPAEAVA PRAEADRLAH
LGVHAQKQPG LNYIGVGLPV GRMSVEQMHG LADIAARLGD GDIRLTVWQN LLISGVADAD
VAQACTAITA LGLSTQATPL QAGLVACTGS KGCRFAAADT KGTARAILAH CEERLDLDGP
VNIHVTGCHN SCAQHYIGDI GLIGARVAIN DDGDTVDGYH LFVGGGFGAD AAIARELYRD
VKAEDAPAVV ERLLKSWLAH REEGEAFAHF TRRMDPDALK ALAEVA
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