| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2468 |
|---|
| Symbol | |
|---|
| ID | 5424592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2759793 |
|---|
| End bp | 2760539 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640881721 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001417367 |
|---|
| Protein GI | 154246409 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.750857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.029017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC TTCTTCTCGC CACTGTCGCA TTCGCGGCGC TCTCCGCTCC GGCCATGGCT
GCTGACCTGG CGACGAAGTA TCCGGTCAAG GCCGTGGCCG TTGTCCCGGT GTTCTCCTGG
ACCGGCTTCT ATATCGGCGC CAACGTCGGT TACGGCGGTG ACAAGTTCAC CTTCGACGAA
GTCGAGTCCT ACTACGGCTA TCCGTACTAC GCCAACAGCA CGAGCCTGAA CTCTTCCGGC
TTCTTCGCCG GCGGTCAGAT CGGCTACAAC TACCAGTTCG CCAACAACGT GGTGCTGGGC
GTCGAGACCG ACCTGCAGTG GTCGGGCATC GAGGGCAAGG AAGATTACTC TTCCGTCTAC
GTCTATGGCG GCTATCCCTA CACCTCCAGC TACGGCGCGT CGGTTGACTA CTTCGGTACG
ATCCGCGCTC GCATCGGCTA CGCTTTCGAC CGGTTCCTGC CCTACATCAC CGGTGGTGCT
GCCTACGGCA AGACCAAGAT CTCGAGCAGC TATGCTGGCG ACGGCTTCGG CTCGCTCAGC
GCTTCGGCCA CCAACTGGGG CTGGACCGTC GGCGGCGGCG TGGAATACGC CATCACCAAC
AACTGGACGT TCAAGACCGA ATATCTGTAC GTCGATCTGG GCAGCACCGA TTACGCCTAC
GCCGACGGCT ACGGCTACTA CAGCTATGCC GGCACCGTGG ACACCAAGTT CCACACCCTC
AAGGCTGGTG TGAACTACAA GTTCTGA
|
|---|
| Protein sequence | MKRLLLATVA FAALSAPAMA ADLATKYPVK AVAVVPVFSW TGFYIGANVG YGGDKFTFDE
VESYYGYPYY ANSTSLNSSG FFAGGQIGYN YQFANNVVLG VETDLQWSGI EGKEDYSSVY
VYGGYPYTSS YGASVDYFGT IRARIGYAFD RFLPYITGGA AYGKTKISSS YAGDGFGSLS
ASATNWGWTV GGGVEYAITN NWTFKTEYLY VDLGSTDYAY ADGYGYYSYA GTVDTKFHTL
KAGVNYKF
|
|---|
| |