Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2451 |
Symbol | |
ID | 5424248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2737595 |
End bp | 2739139 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640881704 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001417350 |
Protein GI | 154246392 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.628376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTCCA TGACGCATCG GGTGTTGGCG CGGGTTCGGG CGCAGGTTCC GACGCGGATT CTGGCACGGG TGGCGGCCGG GCCGCTGGCG GCGCTGGTGC TGTCGGGCTG CGCCGTGGGG CCGGGCTACG AGACACCGCA ACTCGCCATG CCCGACCACT GGAGCAGCGG GCGCGGCGCG AGGGCGGAGG TCGCGCCGCA GCTCCAGCGC TGGTGGCGAC GGCTGGGCGA TGGCGTGCTC GACGGGCTGA TGGAGGAAGC GGTGGCCGGC AATCTCGACG TGGCGACTGC CAAGGCCAAG GTGCGTGCGG CCCGTGCCAC CTATCGCGAG CAGGTGGGCG CCCTGTTTCC GCAGGTCACC GGCAACGCCT CCGCCACACG GGGCGACAAT GGCGGCAACG TGGGGTCGGG GGGCGATGTC ACCGTCGCCA GCACCTATGG CCAGTATCAG GCGGGGCTCG ACGCCAGCTG GGAAATCGAC CTGTTCGGCG CCAACCGCCG GGGCGTGGAG GCCGCTGCCT ACGGCTCGGA TGCAGCGGTG GACGATCTCG ACGCCGCCCT CGTCACCCTC GTGGGCGACG TGGCCACCAA TTATATCGAC GCGCGCGGAT ATCAGGCGCG CATCGCGCTC GCCCGCCGCA CCGCGAGCGC CCAGCGCGAG ACCGCCGCGC TGACCAGGCG CAAGCTCGAC GCCGGCGGCG CCTCTGCTCT GGATGCCGCC AATGCGGCCG GGCAGGCGGC CAGTACCGAG GCGGACATTC CAGAGCTTGA AGCGGCCTAT GCCCAGAGCG TGCATCGCCT GTCCGTGCTC ACGGGGCGGG AGCCGGCGGC GCTCACCGGA CGGTTGGAGC GTCCGCGCGC GGTACCGGCG CCGCGCCTGC CGGTGCCCAA GGGCATTCCA GCGCAGGTGC TCACCGCCCG CCCGGACGTG CGCGCCGCCG AGCGGCGGCT GGGCCAGTCC ACGGCGCTGG TGGGGCAGGC GACGGCCAAC CGCTATCCCT CCATCAGCCT CGCCGGCACG CTCAACACCA CCGGAACGCA ACTGGGGGAT CTGGCGCGCG GCTCCTCCAT CAGCTGGTCG TTCGGGCCGA CACTGACGGT GCCGATCTTC ACCGGCGGGC AGCTCAAGGC GGCGCAGGAA CTGGCGGAGG CAGAGCGCGA CCAGTCGTTC CTCGCCTATC GCGCGGCGGT GCTCACCGCG CTGGAGGATG TGGAGAATGC CTCCGTCTCC CTCGGCAAGC AGCGCCTGAA GGCCGGCCGG CTCGCCGCCT CCGCCGCCTC CTACCGCGAG GCGGGGCGGC TCTCCCACGC GCTCTATGGG GCGGGCTCGT CGAGCTTCCT CGACGTGCTC ACCGCCGAGC GCTCGCTCTA TGCGGCCGAG ACGGCGCTGA TCGAGAGCCG GGTGGCGGTG GCGACCTATT ATGTGGCGCT CAACAAGGCG CTGGGCGGCG GCTGGGACGG GGCGGTGGAC ACGACCACGC CGGTGGTCGT GGACGACAAT ACCGGCCCCC ATTTCGCGCG CCTGCCGGCG TCGGCAATCC AGTGA
|
Protein sequence | MASMTHRVLA RVRAQVPTRI LARVAAGPLA ALVLSGCAVG PGYETPQLAM PDHWSSGRGA RAEVAPQLQR WWRRLGDGVL DGLMEEAVAG NLDVATAKAK VRAARATYRE QVGALFPQVT GNASATRGDN GGNVGSGGDV TVASTYGQYQ AGLDASWEID LFGANRRGVE AAAYGSDAAV DDLDAALVTL VGDVATNYID ARGYQARIAL ARRTASAQRE TAALTRRKLD AGGASALDAA NAAGQAASTE ADIPELEAAY AQSVHRLSVL TGREPAALTG RLERPRAVPA PRLPVPKGIP AQVLTARPDV RAAERRLGQS TALVGQATAN RYPSISLAGT LNTTGTQLGD LARGSSISWS FGPTLTVPIF TGGQLKAAQE LAEAERDQSF LAYRAAVLTA LEDVENASVS LGKQRLKAGR LAASAASYRE AGRLSHALYG AGSSSFLDVL TAERSLYAAE TALIESRVAV ATYYVALNKA LGGGWDGAVD TTTPVVVDDN TGPHFARLPA SAIQ
|
| |