Gene Xaut_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2417 
Symbol 
ID5423688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2698898 
End bp2699341 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content70% 
IMG OID640881670 
ProductRbsD or FucU transport 
Protein accessionYP_001417316 
Protein GI154246358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0558761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.28862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG GCATCGACCC CTTGCTGGGC CCCGATCTGC TGGCCACCCT GCGCGCCATG 
GGCCACGGCG ACGAGATCGC CATCGTGGAC GCCAATTATC CGGCTGAGGC CCACGCCAGG
CGGCTGGTGC GCATGGACGG ACACGATGCC CCGCGCCTCG TCGATGCCGT GCTCTCGGTG
ATGCCGCTCG ATACCGACGT GGCTGAGGCC GCCTTCCGGC CCTGCGCCTT CGGCGACTGC
GCGCGCGAGG AGAGCGTGTT TTCGGAGTTC GAGGCCGCCA TCGCCGCCCG CGAGCCCGGC
TTCAGCCTGG TGCCCATCGC CGGCCCGAGC TTCTACGACC GGGTGCGCGC GGCCTATGCC
ATCGTCGCCA GCGGCGAGCG CCGGCTCTAC GGCAACATCA TCCTGCGCAA GGGCGTGATC
CGACCGCAAG GGGACACGGC ATGA
 
Protein sequence
MLKGIDPLLG PDLLATLRAM GHGDEIAIVD ANYPAEAHAR RLVRMDGHDA PRLVDAVLSV 
MPLDTDVAEA AFRPCAFGDC AREESVFSEF EAAIAAREPG FSLVPIAGPS FYDRVRAAYA
IVASGERRLY GNIILRKGVI RPQGDTA