| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2337 |
|---|
| Symbol | |
|---|
| ID | 5422289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2610988 |
|---|
| End bp | 2612094 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640881591 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001417237 |
|---|
| Protein GI | 154246279 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTC ATTTCGTAGC GGCAATCATG TGTGCCACGC TGGGCTGGGC CGGCGCGGCT
TCGGCCCAGG ACAAGGTCCT CAACGTCTTC AACTGGTCGG ATTATATCGA CCCGACGGTG
CTGGAGGACT TCACCAAGGA AACCGGCATC AAAGTCCGCT ACGACGTCTT CGACAGCAAC
GAGGTGCTGG AGACGAAGCT GCTCGCGGGC AAGACCGGCT ACGACGTGGT GGTGCCGTCC
GGCTCCTTCC TGCAGCGCCA GATCAAGGCC GGCATCTTCC TGACCCTCGA CAAGTCGAAG
ATCCCGAACC TGCAATACGC CTGGCCCGAG GTGACCAAGC GCCTCGCCGT CTACGACCCG
GACAATGCCC ACGCCGTCAA CTACATGTGG GGCACCACGG GCATCGGCTA CAATGTGGAC
AAGGTAAAGG AACGGCTCGG CGACATTCCC ATGAATACGT GGGACATCGT GTTCAAGCCG
GAAATCCTCT CCAAGCTCAA GGATTGCGGC GTCTATTTCC TCGACGGCCC GGAGGAGGTG
ATCCCCTCCG CCATGAAGTA TCTGGGGCTC GATCCCAATT CGAAGAACCC GGACGACATC
GCCAAGGCCG GCGAACTGCT CATGTCGGTT CGCCCCTATA TCAAGAAGTT CGATTCCTCG
GGCTATATCA ATGCCCTGGC GCGCGGCGAC ATCTGTCTGG CGGTGGGCTG GTCGGGTGAC
GTGTTCCAGG CCAAGACCCG CGCCGCCGAG GCCGCGAAGA AGACCAAGAA GCCGCCGGTG
AACGTGGCCT ACGTGATCCC GAAGCAGGGC GCGCTCATGT GGTTCGACAA TTTCGCCATC
CCCAAGGATG CGAAGAATAT CGACAATGCC CTCGTCTTCA TCAACTACAT GATGCGGCCG
GAAGTGGCGG CGAAGAACTC GAACTTCATT TCCTATGCCA ACGGCAACCT GGAATCGCAG
AAGTTCATCG ACAAGGACAT CCTGAACAAC CCGTCCATCT ACCCGGACAA GGAGACGTTC
GAGCGGCTGT TCATCGTCAC CACCAACGAG CCTCCGGTGC AGCGGGTCAT CACCAAGACC
TGGAACAGCT TCAAGCGCGG CAAGTGA
|
|---|
| Protein sequence | MRRHFVAAIM CATLGWAGAA SAQDKVLNVF NWSDYIDPTV LEDFTKETGI KVRYDVFDSN
EVLETKLLAG KTGYDVVVPS GSFLQRQIKA GIFLTLDKSK IPNLQYAWPE VTKRLAVYDP
DNAHAVNYMW GTTGIGYNVD KVKERLGDIP MNTWDIVFKP EILSKLKDCG VYFLDGPEEV
IPSAMKYLGL DPNSKNPDDI AKAGELLMSV RPYIKKFDSS GYINALARGD ICLAVGWSGD
VFQAKTRAAE AAKKTKKPPV NVAYVIPKQG ALMWFDNFAI PKDAKNIDNA LVFINYMMRP
EVAAKNSNFI SYANGNLESQ KFIDKDILNN PSIYPDKETF ERLFIVTTNE PPVQRVITKT
WNSFKRGK
|
|---|
| |